Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTNND1O60716 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.95■□□□□ 0.46
CTNND1O60716 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTNND1O60716 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTNND1O60716 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.95■□□□□ 0.46
CTNND1O60716 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTNND1O60716 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTNND1O60716 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTNND1O60716 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTNND1O60716 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.95■□□□□ 0.46
CTNND1O60716 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
CTNND1O60716 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.95■□□□□ 0.46
CTNND1O60716 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTNND1O60716 AC005077.2-201ENST00000449786 690 ntBASIC17.95■□□□□ 0.46
CTNND1O60716 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTNND1O60716 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.95■□□□□ 0.46
CTNND1O60716 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTNND1O60716 RN7SL713P-201ENST00000582127 302 ntBASIC17.95■□□□□ 0.46
CTNND1O60716 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.95■□□□□ 0.46
CTNND1O60716 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.95■□□□□ 0.46
CTNND1O60716 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.95■□□□□ 0.46
CTNND1O60716 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.95■□□□□ 0.46
CTNND1O60716 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.95■□□□□ 0.46
CTNND1O60716 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.95■□□□□ 0.46
CTNND1O60716 AL021578.1-201ENST00000613646 709 ntBASIC17.95■□□□□ 0.46
CTNND1O60716 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CTNND1O60716 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTNND1O60716 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTNND1O60716 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CTNND1O60716 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTNND1O60716 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CTNND1O60716 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.95■□□□□ 0.46
CTNND1O60716 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
CTNND1O60716 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CTNND1O60716 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTNND1O60716 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTNND1O60716 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.95■□□□□ 0.46
CTNND1O60716 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTNND1O60716 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTNND1O60716 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.94■□□□□ 0.46
CTNND1O60716 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTNND1O60716 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTNND1O60716 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.94■□□□□ 0.46
CTNND1O60716 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
CTNND1O60716 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
CTNND1O60716 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTNND1O60716 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
CTNND1O60716 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTNND1O60716 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTNND1O60716 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.94■□□□□ 0.46
CTNND1O60716 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTNND1O60716 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.94■□□□□ 0.46
CTNND1O60716 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.94■□□□□ 0.46
CTNND1O60716 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.94■□□□□ 0.46
CTNND1O60716 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.94■□□□□ 0.46
CTNND1O60716 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CTNND1O60716 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTNND1O60716 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.94■□□□□ 0.46
CTNND1O60716 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
CTNND1O60716 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTNND1O60716 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CTNND1O60716 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.94■□□□□ 0.46
CTNND1O60716 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.94■□□□□ 0.46
CTNND1O60716 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CTNND1O60716 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTNND1O60716 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTNND1O60716 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTNND1O60716 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.93■□□□□ 0.46
CTNND1O60716 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CTNND1O60716 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTNND1O60716 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTNND1O60716 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTNND1O60716 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTNND1O60716 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.93■□□□□ 0.46
CTNND1O60716 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTNND1O60716 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTNND1O60716 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTNND1O60716 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTNND1O60716 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTNND1O60716 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.93■□□□□ 0.46
CTNND1O60716 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTNND1O60716 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
CTNND1O60716 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CTNND1O60716 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CTNND1O60716 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC17.93■□□□□ 0.46
CTNND1O60716 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.93■□□□□ 0.46
CTNND1O60716 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.93■□□□□ 0.46
CTNND1O60716 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.93■□□□□ 0.46
CTNND1O60716 RNA5SP423-201ENST00000517127 109 ntBASIC17.93■□□□□ 0.46
CTNND1O60716 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.93■□□□□ 0.46
CTNND1O60716 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.93■□□□□ 0.46
CTNND1O60716 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.93■□□□□ 0.46
CTNND1O60716 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.93■□□□□ 0.46
CTNND1O60716 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC17.93■□□□□ 0.46
CTNND1O60716 PPY2P-201ENST00000582808 702 ntBASIC17.93■□□□□ 0.46
CTNND1O60716 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CTNND1O60716 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CTNND1O60716 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.93■□□□□ 0.46
CTNND1O60716 OR10B1P-201ENST00000601666 907 ntBASIC17.93■□□□□ 0.46
CTNND1O60716 ZACNP1-201ENST00000612259 710 ntBASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms