Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SSSCA1O60232 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSSCA1O60232 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSSCA1O60232 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.68□□□□□ -0.38
SSSCA1O60232 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.68□□□□□ -0.38
SSSCA1O60232 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SSSCA1O60232 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSSCA1O60232 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SSSCA1O60232 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSSCA1O60232 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSSCA1O60232 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSSCA1O60232 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
SSSCA1O60232 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.68□□□□□ -0.38
SSSCA1O60232 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSSCA1O60232 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SSSCA1O60232 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
SSSCA1O60232 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.68□□□□□ -0.38
SSSCA1O60232 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
SSSCA1O60232 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
SSSCA1O60232 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSSCA1O60232 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SSSCA1O60232 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSSCA1O60232 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.68□□□□□ -0.38
SSSCA1O60232 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSSCA1O60232 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSSCA1O60232 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SSSCA1O60232 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
SSSCA1O60232 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSSCA1O60232 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
SSSCA1O60232 METTL26-205ENST00000397666 726 ntTSL 2 BASIC12.68□□□□□ -0.38
SSSCA1O60232 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC12.68□□□□□ -0.38
SSSCA1O60232 FALEC-201ENST00000416894 566 ntTSL 3 BASIC12.68□□□□□ -0.38
SSSCA1O60232 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC12.68□□□□□ -0.38
SSSCA1O60232 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC12.68□□□□□ -0.38
SSSCA1O60232 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SSSCA1O60232 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC12.68□□□□□ -0.38
SSSCA1O60232 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
SSSCA1O60232 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC12.68□□□□□ -0.38
SSSCA1O60232 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC12.68□□□□□ -0.38
SSSCA1O60232 CD63-210ENST00000550776 870 ntTSL 5 BASIC12.68□□□□□ -0.38
SSSCA1O60232 PRELID1P1-202ENST00000567272 903 ntBASIC12.68□□□□□ -0.38
SSSCA1O60232 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSSCA1O60232 AC061975.2-201ENST00000581722 295 ntBASIC12.68□□□□□ -0.38
SSSCA1O60232 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC12.68□□□□□ -0.38
SSSCA1O60232 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC12.68□□□□□ -0.38
SSSCA1O60232 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC12.68□□□□□ -0.38
SSSCA1O60232 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
SSSCA1O60232 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
SSSCA1O60232 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
SSSCA1O60232 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSSCA1O60232 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SSSCA1O60232 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
SSSCA1O60232 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.68□□□□□ -0.38
SSSCA1O60232 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSSCA1O60232 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.68□□□□□ -0.38
SSSCA1O60232 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSSCA1O60232 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSSCA1O60232 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSSCA1O60232 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSSCA1O60232 AL928921.2-201ENST00000641325 2442 ntBASIC12.68□□□□□ -0.38
SSSCA1O60232 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSSCA1O60232 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.68□□□□□ -0.38
SSSCA1O60232 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSSCA1O60232 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSSCA1O60232 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SSSCA1O60232 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
SSSCA1O60232 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
SSSCA1O60232 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSSCA1O60232 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SSSCA1O60232 AC136759.1-202ENST00000530858 2194 ntBASIC12.67□□□□□ -0.38
SSSCA1O60232 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSSCA1O60232 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSSCA1O60232 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSSCA1O60232 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSSCA1O60232 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSSCA1O60232 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSSCA1O60232 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.67□□□□□ -0.38
SSSCA1O60232 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSSCA1O60232 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSSCA1O60232 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.67□□□□□ -0.38
SSSCA1O60232 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
SSSCA1O60232 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.67□□□□□ -0.38
SSSCA1O60232 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSSCA1O60232 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SSSCA1O60232 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SSSCA1O60232 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSSCA1O60232 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSSCA1O60232 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.67□□□□□ -0.38
SSSCA1O60232 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSSCA1O60232 HSPA7-201ENST00000445535 1927 ntBASIC12.67□□□□□ -0.38
SSSCA1O60232 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SSSCA1O60232 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSSCA1O60232 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
SSSCA1O60232 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SSSCA1O60232 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSSCA1O60232 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSSCA1O60232 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SSSCA1O60232 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.67□□□□□ -0.38
SSSCA1O60232 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12.67□□□□□ -0.38
SSSCA1O60232 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms