Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 AC006058.4-201ENST00000624016 1670 ntBASIC13.79□□□□□ -0.2
TRAF3IP2O43734 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 MIR661-201ENST00000384842 89 ntBASIC13.79□□□□□ -0.2
TRAF3IP2O43734 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 AC104457.1-201ENST00000401024 814 ntBASIC13.79□□□□□ -0.2
TRAF3IP2O43734 MEP1AP4-201ENST00000423244 1087 ntBASIC13.79□□□□□ -0.2
TRAF3IP2O43734 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 AC067930.6-201ENST00000623257 4947 ntBASIC13.79□□□□□ -0.2
TRAF3IP2O43734 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 TCAF2P1-201ENST00000291129 2421 ntBASIC13.78□□□□□ -0.2
TRAF3IP2O43734 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 TSPY16P-201ENST00000449843 468 ntBASIC13.78□□□□□ -0.2
TRAF3IP2O43734 RN7SL399P-201ENST00000471648 279 ntBASIC13.78□□□□□ -0.2
TRAF3IP2O43734 FAM86LP-201ENST00000478302 853 ntBASIC13.78□□□□□ -0.2
TRAF3IP2O43734 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 AC055876.2-201ENST00000531834 546 ntBASIC13.78□□□□□ -0.2
TRAF3IP2O43734 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 RRP7BP-205ENST00000566851 833 ntBASIC13.78□□□□□ -0.2
TRAF3IP2O43734 AC011467.4-201ENST00000594891 528 ntBASIC13.78□□□□□ -0.2
TRAF3IP2O43734 AC099568.2-201ENST00000609194 695 ntBASIC13.78□□□□□ -0.2
TRAF3IP2O43734 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms