Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
CHMP2AO43633 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CHMP2AO43633 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP2AO43633 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
CHMP2AO43633 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP2AO43633 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP2AO43633 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP2AO43633 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.37■□□□□ 0.37
CHMP2AO43633 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP2AO43633 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.37■□□□□ 0.37
CHMP2AO43633 U91328.1-201ENST00000437528 223 ntBASIC17.37■□□□□ 0.37
CHMP2AO43633 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.37■□□□□ 0.37
CHMP2AO43633 ENPP7P5-201ENST00000541031 1031 ntBASIC17.37■□□□□ 0.37
CHMP2AO43633 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.37■□□□□ 0.37
CHMP2AO43633 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.37■□□□□ 0.37
CHMP2AO43633 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.37■□□□□ 0.37
CHMP2AO43633 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP2AO43633 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.37■□□□□ 0.37
CHMP2AO43633 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CHMP2AO43633 TSPY26P-202ENST00000565928 3884 ntBASIC17.37■□□□□ 0.37
CHMP2AO43633 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CHMP2AO43633 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP2AO43633 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP2AO43633 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP2AO43633 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP2AO43633 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP2AO43633 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.37■□□□□ 0.37
CHMP2AO43633 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP2AO43633 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP2AO43633 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP2AO43633 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.37■□□□□ 0.37
CHMP2AO43633 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP2AO43633 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CHMP2AO43633 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP2AO43633 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.36■□□□□ 0.37
CHMP2AO43633 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP2AO43633 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP2AO43633 AP002414.2-201ENST00000591780 3365 ntBASIC17.36■□□□□ 0.37
CHMP2AO43633 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP2AO43633 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP2AO43633 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.36■□□□□ 0.37
CHMP2AO43633 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.36■□□□□ 0.37
CHMP2AO43633 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP2AO43633 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.36■□□□□ 0.37
CHMP2AO43633 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CHMP2AO43633 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.36■□□□□ 0.37
CHMP2AO43633 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CHMP2AO43633 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP2AO43633 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.36■□□□□ 0.37
CHMP2AO43633 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.36■□□□□ 0.37
CHMP2AO43633 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CHMP2AO43633 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP2AO43633 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP2AO43633 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CHMP2AO43633 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP2AO43633 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP2AO43633 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP2AO43633 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.36■□□□□ 0.37
CHMP2AO43633 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CHMP2AO43633 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP2AO43633 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.36■□□□□ 0.37
CHMP2AO43633 C18orf15-201ENST00000623680 2534 ntBASIC17.36■□□□□ 0.37
CHMP2AO43633 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.35■□□□□ 0.37
CHMP2AO43633 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CHMP2AO43633 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CHMP2AO43633 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.35■□□□□ 0.37
CHMP2AO43633 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP2AO43633 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.35■□□□□ 0.37
CHMP2AO43633 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CHMP2AO43633 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP2AO43633 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CHMP2AO43633 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP2AO43633 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP2AO43633 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP2AO43633 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.35■□□□□ 0.37
CHMP2AO43633 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.35■□□□□ 0.37
CHMP2AO43633 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CHMP2AO43633 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.35■□□□□ 0.37
CHMP2AO43633 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP2AO43633 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.35■□□□□ 0.37
CHMP2AO43633 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CHMP2AO43633 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.35■□□□□ 0.37
CHMP2AO43633 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.35■□□□□ 0.37
CHMP2AO43633 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.35■□□□□ 0.37
CHMP2AO43633 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.35■□□□□ 0.37
CHMP2AO43633 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.35■□□□□ 0.37
CHMP2AO43633 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.35■□□□□ 0.37
CHMP2AO43633 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.35■□□□□ 0.37
CHMP2AO43633 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
CHMP2AO43633 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CHMP2AO43633 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP2AO43633 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP2AO43633 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP2AO43633 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP2AO43633 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP2AO43633 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP2AO43633 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CHMP2AO43633 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.35■□□□□ 0.37
CHMP2AO43633 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP2AO43633 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms