Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KCNQ3O43525 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KCNQ3O43525 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC19.62■□□□□ 0.73
KCNQ3O43525 RN7SL713P-201ENST00000582127 302 ntBASIC19.62■□□□□ 0.73
KCNQ3O43525 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KCNQ3O43525 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KCNQ3O43525 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KCNQ3O43525 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
KCNQ3O43525 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KCNQ3O43525 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
KCNQ3O43525 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KCNQ3O43525 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
KCNQ3O43525 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
KCNQ3O43525 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KCNQ3O43525 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC19.61■□□□□ 0.73
KCNQ3O43525 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KCNQ3O43525 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC19.61■□□□□ 0.73
KCNQ3O43525 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KCNQ3O43525 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KCNQ3O43525 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
KCNQ3O43525 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KCNQ3O43525 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KCNQ3O43525 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
KCNQ3O43525 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KCNQ3O43525 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
KCNQ3O43525 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KCNQ3O43525 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KCNQ3O43525 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC19.61■□□□□ 0.73
KCNQ3O43525 HIST2H2BB-201ENST00000449108 381 ntBASIC19.61■□□□□ 0.73
KCNQ3O43525 OARD1-212ENST00000482515 832 ntTSL 2 BASIC19.61■□□□□ 0.73
KCNQ3O43525 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC19.61■□□□□ 0.73
KCNQ3O43525 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC19.61■□□□□ 0.73
KCNQ3O43525 AP001258.2-201ENST00000529891 490 ntBASIC19.61■□□□□ 0.73
KCNQ3O43525 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC19.61■□□□□ 0.73
KCNQ3O43525 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KCNQ3O43525 AC138466.3-201ENST00000619983 221 ntBASIC19.61■□□□□ 0.73
KCNQ3O43525 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
KCNQ3O43525 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KCNQ3O43525 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
KCNQ3O43525 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KCNQ3O43525 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KCNQ3O43525 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KCNQ3O43525 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KCNQ3O43525 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KCNQ3O43525 AC136621.1-201ENST00000624017 2304 ntBASIC19.6■□□□□ 0.73
KCNQ3O43525 AL137783.1-201ENST00000623494 1896 ntBASIC19.6■□□□□ 0.73
KCNQ3O43525 AC020658.6-201ENST00000623564 1870 ntBASIC19.6■□□□□ 0.73
KCNQ3O43525 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KCNQ3O43525 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC19.6■□□□□ 0.73
KCNQ3O43525 GRN-222ENST00000639447 1314 ntTSL 2 BASIC19.6■□□□□ 0.73
KCNQ3O43525 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KCNQ3O43525 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KCNQ3O43525 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KCNQ3O43525 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
KCNQ3O43525 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC19.6■□□□□ 0.73
KCNQ3O43525 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC19.6■□□□□ 0.73
KCNQ3O43525 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
KCNQ3O43525 AC100850.1-201ENST00000506768 649 ntBASIC19.6■□□□□ 0.73
KCNQ3O43525 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC19.6■□□□□ 0.73
KCNQ3O43525 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC19.6■□□□□ 0.73
KCNQ3O43525 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC19.6■□□□□ 0.73
KCNQ3O43525 ACTG1P17-201ENST00000558391 1119 ntBASIC19.6■□□□□ 0.73
KCNQ3O43525 AC005730.2-201ENST00000564549 1184 ntBASIC19.6■□□□□ 0.73
KCNQ3O43525 KC6-205ENST00000599934 556 ntTSL 4 BASIC19.6■□□□□ 0.73
KCNQ3O43525 AL451050.2-201ENST00000606967 682 ntBASIC19.6■□□□□ 0.73
KCNQ3O43525 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC19.6■□□□□ 0.73
KCNQ3O43525 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC19.6■□□□□ 0.73
KCNQ3O43525 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
KCNQ3O43525 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KCNQ3O43525 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KCNQ3O43525 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
KCNQ3O43525 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC19.6■□□□□ 0.73
KCNQ3O43525 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KCNQ3O43525 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KCNQ3O43525 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KCNQ3O43525 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
KCNQ3O43525 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
KCNQ3O43525 GSN-206ENST00000394353 2311 ntTSL 2 BASIC19.59■□□□□ 0.73
KCNQ3O43525 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
KCNQ3O43525 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KCNQ3O43525 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
KCNQ3O43525 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
KCNQ3O43525 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
KCNQ3O43525 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.59■□□□□ 0.73
KCNQ3O43525 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
KCNQ3O43525 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KCNQ3O43525 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
KCNQ3O43525 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KCNQ3O43525 GHSR-202ENST00000427970 912 ntBASIC19.59■□□□□ 0.73
KCNQ3O43525 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC19.59■□□□□ 0.73
KCNQ3O43525 MESTP3-201ENST00000503460 968 ntBASIC19.59■□□□□ 0.73
KCNQ3O43525 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
KCNQ3O43525 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
KCNQ3O43525 MIR4683-201ENST00000579659 81 ntBASIC19.59■□□□□ 0.73
KCNQ3O43525 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
KCNQ3O43525 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC19.59■□□□□ 0.73
KCNQ3O43525 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC19.59■□□□□ 0.73
KCNQ3O43525 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC19.59■□□□□ 0.73
KCNQ3O43525 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KCNQ3O43525 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms