Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 AC023310.3-201ENST00000557027 670 ntBASIC13.66□□□□□ -0.22
NPIPB4C9JG80 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 AC100756.1-201ENST00000562736 682 ntBASIC13.66□□□□□ -0.22
NPIPB4C9JG80 AC138749.3-201ENST00000567691 622 ntBASIC13.66□□□□□ -0.22
NPIPB4C9JG80 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 AL049840.4-201ENST00000602422 811 ntBASIC13.66□□□□□ -0.22
NPIPB4C9JG80 AC116165.1-201ENST00000611806 668 ntBASIC13.66□□□□□ -0.22
NPIPB4C9JG80 AC009118.2-201ENST00000613275 655 ntBASIC13.66□□□□□ -0.22
NPIPB4C9JG80 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 AL138799.1-201ENST00000448213 1675 ntBASIC13.66□□□□□ -0.22
NPIPB4C9JG80 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 AC023824.1-201ENST00000562945 2975 ntBASIC13.65□□□□□ -0.22
NPIPB4C9JG80 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 CYMP-203ENST00000474680 1263 ntBASIC13.65□□□□□ -0.22
NPIPB4C9JG80 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 AC004790.1-201ENST00000612686 536 ntBASIC13.65□□□□□ -0.22
NPIPB4C9JG80 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 PRSS30P-206ENST00000641773 873 ntBASIC13.65□□□□□ -0.22
NPIPB4C9JG80 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPB4C9JG80 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms