Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
LINC00473A8K010 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00473A8K010 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00473A8K010 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
LINC00473A8K010 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00473A8K010 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00473A8K010 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00473A8K010 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00473A8K010 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.61□□□□□ -0.39
LINC00473A8K010 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00473A8K010 AC005912.2-201ENST00000619492 2400 ntBASIC12.61□□□□□ -0.39
LINC00473A8K010 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC12.61□□□□□ -0.39
LINC00473A8K010 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.61□□□□□ -0.39
LINC00473A8K010 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC12.61□□□□□ -0.39
LINC00473A8K010 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.61□□□□□ -0.39
LINC00473A8K010 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
LINC00473A8K010 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00473A8K010 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
LINC00473A8K010 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
LINC00473A8K010 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
LINC00473A8K010 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.61□□□□□ -0.39
LINC00473A8K010 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00473A8K010 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00473A8K010 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00473A8K010 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00473A8K010 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
LINC00473A8K010 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00473A8K010 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00473A8K010 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.61□□□□□ -0.39
LINC00473A8K010 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00473A8K010 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00473A8K010 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00473A8K010 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00473A8K010 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00473A8K010 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00473A8K010 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00473A8K010 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00473A8K010 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
LINC00473A8K010 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00473A8K010 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC12.61□□□□□ -0.39
LINC00473A8K010 AC015922.1-201ENST00000421102 1152 ntBASIC12.61□□□□□ -0.39
LINC00473A8K010 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00473A8K010 RPL13P2-201ENST00000440687 659 ntBASIC12.61□□□□□ -0.39
LINC00473A8K010 AP006288.1-201ENST00000446065 395 ntBASIC12.61□□□□□ -0.39
LINC00473A8K010 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00473A8K010 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00473A8K010 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
LINC00473A8K010 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00473A8K010 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00473A8K010 DAD1-205ENST00000543337 501 ntTSL 3 BASIC12.61□□□□□ -0.39
LINC00473A8K010 AC092865.5-201ENST00000545435 363 ntBASIC12.61□□□□□ -0.39
LINC00473A8K010 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
LINC00473A8K010 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC12.61□□□□□ -0.39
LINC00473A8K010 AL512361.1-201ENST00000554200 418 ntBASIC12.61□□□□□ -0.39
LINC00473A8K010 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00473A8K010 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.61□□□□□ -0.39
LINC00473A8K010 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.61□□□□□ -0.39
LINC00473A8K010 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00473A8K010 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00473A8K010 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00473A8K010 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00473A8K010 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00473A8K010 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00473A8K010 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00473A8K010 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00473A8K010 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00473A8K010 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00473A8K010 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00473A8K010 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00473A8K010 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.6□□□□□ -0.39
LINC00473A8K010 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00473A8K010 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC00473A8K010 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC00473A8K010 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00473A8K010 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00473A8K010 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00473A8K010 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
LINC00473A8K010 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC00473A8K010 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00473A8K010 AC005089.1-201ENST00000619486 2241 ntBASIC12.6□□□□□ -0.39
LINC00473A8K010 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00473A8K010 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00473A8K010 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
LINC00473A8K010 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.6□□□□□ -0.39
LINC00473A8K010 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.6□□□□□ -0.39
LINC00473A8K010 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00473A8K010 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00473A8K010 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00473A8K010 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC00473A8K010 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00473A8K010 AC109322.1-201ENST00000524499 1264 ntBASIC12.6□□□□□ -0.39
LINC00473A8K010 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC12.6□□□□□ -0.39
LINC00473A8K010 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00473A8K010 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00473A8K010 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC12.6□□□□□ -0.39
LINC00473A8K010 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC00473A8K010 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC12.6□□□□□ -0.39
LINC00473A8K010 TEX28P1-201ENST00000613479 1221 ntBASIC12.6□□□□□ -0.39
LINC00473A8K010 TEX28P2-201ENST00000617764 1221 ntBASIC12.6□□□□□ -0.39
LINC00473A8K010 SPDYE12P-201ENST00000618416 771 ntBASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms