Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 REXO1L2P-201ENST00000425429 2069 ntBASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 UPK3BP1-201ENST00000428678 509 ntBASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 UNC93B6-202ENST00000528242 690 ntBASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 IFNL4P1-201ENST00000607083 540 ntBASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 AC097359.2-201ENST00000604992 2389 ntBASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV18A0A075B6X5 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 KRT18P67-201ENST00000432816 1264 ntBASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 RNF146-204ENST00000476956 884 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 KRT18P35-201ENST00000510488 1269 ntBASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 AC073389.1-201ENST00000595595 795 ntBASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 AC097359.3-201ENST00000603982 1210 ntBASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 AC148477.8-201ENST00000624298 468 ntBASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 FAM215A-202ENST00000632077 792 ntBASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 AC079781.5-202ENST00000641784 3743 ntBASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms