Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DDX49Q9Y6V7 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DDX49Q9Y6V7 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DDX49Q9Y6V7 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX49Q9Y6V7 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC18.7■□□□□ 0.58
DDX49Q9Y6V7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX49Q9Y6V7 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC18.7■□□□□ 0.58
DDX49Q9Y6V7 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX49Q9Y6V7 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX49Q9Y6V7 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX49Q9Y6V7 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.69■□□□□ 0.58
DDX49Q9Y6V7 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.69■□□□□ 0.58
DDX49Q9Y6V7 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX49Q9Y6V7 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX49Q9Y6V7 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DDX49Q9Y6V7 AC022144.1-201ENST00000602255 1580 ntBASIC18.69■□□□□ 0.58
DDX49Q9Y6V7 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DDX49Q9Y6V7 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX49Q9Y6V7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.69■□□□□ 0.58
DDX49Q9Y6V7 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
DDX49Q9Y6V7 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX49Q9Y6V7 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DDX49Q9Y6V7 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
DDX49Q9Y6V7 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DDX49Q9Y6V7 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX49Q9Y6V7 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DDX49Q9Y6V7 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
DDX49Q9Y6V7 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.69■□□□□ 0.58
DDX49Q9Y6V7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
DDX49Q9Y6V7 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX49Q9Y6V7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.69■□□□□ 0.58
DDX49Q9Y6V7 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX49Q9Y6V7 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX49Q9Y6V7 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.69■□□□□ 0.58
DDX49Q9Y6V7 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX49Q9Y6V7 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX49Q9Y6V7 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX49Q9Y6V7 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
DDX49Q9Y6V7 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
DDX49Q9Y6V7 AC104581.4-201ENST00000623126 3052 ntBASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 UCKL1-AS1-201ENST00000623569 3602 ntBASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 CRB3P1-201ENST00000449338 276 ntBASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 RNA5SP410-201ENST00000516285 106 ntBASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 AC005225.4-201ENST00000557330 545 ntBASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 AL133215.2-201ENST00000609242 977 ntBASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 AL844908.2-201ENST00000609461 460 ntBASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 AC004790.1-201ENST00000612686 536 ntBASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 TEX28P1-201ENST00000613479 1221 ntBASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 TEX28P2-201ENST00000617764 1221 ntBASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
DDX49Q9Y6V7 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 AC013726.1-201ENST00000563747 2285 ntBASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 AC232323.1-201ENST00000540724 2099 ntBASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 AGAP7P-201ENST00000582299 2062 ntBASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 REXO1L5P-201ENST00000622260 2098 ntBASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 AGAP14-201ENST00000624701 2060 ntBASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms