Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 AC100757.3-201ENST00000622361 1406 ntBASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 SDHAP3-202ENST00000515467 728 ntBASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 AC093512.1-201ENST00000617969 520 ntBASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 Z97205.2-201ENST00000564697 1639 ntBASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAPPC4Q9Y296 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 AC148477.4-201ENST00000613430 1793 ntBASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 AJ011931.1-201ENST00000618749 2492 ntBASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 AC006504.5-208ENST00000588784 2401 ntBASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 AC106028.4-201ENST00000614509 607 ntBASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 C18orf15-201ENST00000623680 2534 ntBASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC4Q9Y296 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms