Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGB4Q9UN71 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
PCDHGB4Q9UN71 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGB4Q9UN71 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGB4Q9UN71 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGB4Q9UN71 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDHGB4Q9UN71 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGB4Q9UN71 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGB4Q9UN71 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
PCDHGB4Q9UN71 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.11■□□□□ 0.01
PCDHGB4Q9UN71 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
PCDHGB4Q9UN71 C8orf49-201ENST00000525043 1968 ntBASIC15.11■□□□□ 0.01
PCDHGB4Q9UN71 REXO1L1P-202ENST00000608646 1974 ntBASIC15.11■□□□□ 0.01
PCDHGB4Q9UN71 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGB4Q9UN71 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
PCDHGB4Q9UN71 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGB4Q9UN71 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGB4Q9UN71 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 HLA-H-201ENST00000383620 1096 ntBASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 AC023274.1-201ENST00000418278 595 ntBASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 AL139010.1-201ENST00000454878 894 ntBASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 AC040169.1-201ENST00000565382 521 ntBASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 AC026120.1-201ENST00000611536 926 ntBASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
PCDHGB4Q9UN71 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 ACTG1P14-201ENST00000446382 1122 ntBASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 KRT8P23-201ENST00000560090 1207 ntBASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB4Q9UN71 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms