Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SYNPO2Q9UMS6 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SYNPO2Q9UMS6 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SYNPO2Q9UMS6 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SYNPO2Q9UMS6 AC004898.1-201ENST00000451057 766 ntBASIC17.6■□□□□ 0.41
SYNPO2Q9UMS6 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.6■□□□□ 0.41
SYNPO2Q9UMS6 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
SYNPO2Q9UMS6 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SYNPO2Q9UMS6 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
SYNPO2Q9UMS6 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.6■□□□□ 0.41
SYNPO2Q9UMS6 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.6■□□□□ 0.41
SYNPO2Q9UMS6 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.6■□□□□ 0.41
SYNPO2Q9UMS6 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SYNPO2Q9UMS6 AC004466.1-201ENST00000599515 1080 ntBASIC17.6■□□□□ 0.41
SYNPO2Q9UMS6 AC138696.2-201ENST00000607376 223 ntBASIC17.6■□□□□ 0.41
SYNPO2Q9UMS6 AC005695.3-201ENST00000614522 232 ntBASIC17.6■□□□□ 0.41
SYNPO2Q9UMS6 WASH3P-207ENST00000560956 1394 ntBASIC17.6■□□□□ 0.41
SYNPO2Q9UMS6 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SYNPO2Q9UMS6 AL137783.1-201ENST00000623494 1896 ntBASIC17.6■□□□□ 0.41
SYNPO2Q9UMS6 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SYNPO2Q9UMS6 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.6■□□□□ 0.41
SYNPO2Q9UMS6 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.6■□□□□ 0.41
SYNPO2Q9UMS6 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SYNPO2Q9UMS6 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SYNPO2Q9UMS6 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.59■□□□□ 0.41
SYNPO2Q9UMS6 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SYNPO2Q9UMS6 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SYNPO2Q9UMS6 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SYNPO2Q9UMS6 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SYNPO2Q9UMS6 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SYNPO2Q9UMS6 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SYNPO2Q9UMS6 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SYNPO2Q9UMS6 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.59■□□□□ 0.41
SYNPO2Q9UMS6 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.59■□□□□ 0.41
SYNPO2Q9UMS6 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SYNPO2Q9UMS6 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SYNPO2Q9UMS6 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SYNPO2Q9UMS6 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.59■□□□□ 0.41
SYNPO2Q9UMS6 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SYNPO2Q9UMS6 POM121L10P-201ENST00000436994 1285 ntBASIC17.59■□□□□ 0.41
SYNPO2Q9UMS6 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.59■□□□□ 0.41
SYNPO2Q9UMS6 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SYNPO2Q9UMS6 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.59■□□□□ 0.41
SYNPO2Q9UMS6 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.59■□□□□ 0.41
SYNPO2Q9UMS6 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.59■□□□□ 0.41
SYNPO2Q9UMS6 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.59■□□□□ 0.41
SYNPO2Q9UMS6 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.59■□□□□ 0.41
SYNPO2Q9UMS6 AL008638.5-201ENST00000623814 1298 ntBASIC17.59■□□□□ 0.41
SYNPO2Q9UMS6 PRAL-201ENST00000624952 3286 ntBASIC17.59■□□□□ 0.41
SYNPO2Q9UMS6 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SYNPO2Q9UMS6 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SYNPO2Q9UMS6 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SYNPO2Q9UMS6 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SYNPO2Q9UMS6 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SYNPO2Q9UMS6 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SYNPO2Q9UMS6 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.58■□□□□ 0.41
SYNPO2Q9UMS6 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SYNPO2Q9UMS6 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SYNPO2Q9UMS6 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SYNPO2Q9UMS6 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
SYNPO2Q9UMS6 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SYNPO2Q9UMS6 LILRP1-201ENST00000444199 1370 ntBASIC17.58■□□□□ 0.4
SYNPO2Q9UMS6 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SYNPO2Q9UMS6 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.58■□□□□ 0.4
SYNPO2Q9UMS6 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SYNPO2Q9UMS6 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SYNPO2Q9UMS6 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SYNPO2Q9UMS6 AC004945.1-201ENST00000416738 983 ntBASIC17.58■□□□□ 0.4
SYNPO2Q9UMS6 TLE1P1-201ENST00000422965 589 ntBASIC17.58■□□□□ 0.4
SYNPO2Q9UMS6 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.58■□□□□ 0.4
SYNPO2Q9UMS6 AC007969.1-201ENST00000433675 447 ntBASIC17.58■□□□□ 0.4
SYNPO2Q9UMS6 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SYNPO2Q9UMS6 KRT8P13-201ENST00000463294 1010 ntBASIC17.58■□□□□ 0.4
SYNPO2Q9UMS6 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
SYNPO2Q9UMS6 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.58■□□□□ 0.4
SYNPO2Q9UMS6 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.58■□□□□ 0.4
SYNPO2Q9UMS6 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.58■□□□□ 0.4
SYNPO2Q9UMS6 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.58■□□□□ 0.4
SYNPO2Q9UMS6 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.58■□□□□ 0.4
SYNPO2Q9UMS6 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
SYNPO2Q9UMS6 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.58■□□□□ 0.4
SYNPO2Q9UMS6 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.58■□□□□ 0.4
SYNPO2Q9UMS6 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.58■□□□□ 0.4
SYNPO2Q9UMS6 AL022328.3-201ENST00000607943 679 ntBASIC17.58■□□□□ 0.4
SYNPO2Q9UMS6 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
SYNPO2Q9UMS6 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SYNPO2Q9UMS6 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SYNPO2Q9UMS6 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SYNPO2Q9UMS6 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SYNPO2Q9UMS6 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.58■□□□□ 0.4
SYNPO2Q9UMS6 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SYNPO2Q9UMS6 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SYNPO2Q9UMS6 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SYNPO2Q9UMS6 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SYNPO2Q9UMS6 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SYNPO2Q9UMS6 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.58■□□□□ 0.4
SYNPO2Q9UMS6 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SYNPO2Q9UMS6 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SYNPO2Q9UMS6 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SYNPO2Q9UMS6 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms