Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CNTN3Q9P232 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CNTN3Q9P232 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.57■□□□□ 0.24
CNTN3Q9P232 AL354718.3-201ENST00000616414 581 ntBASIC16.57■□□□□ 0.24
CNTN3Q9P232 CR382287.1-201ENST00000623954 586 ntBASIC16.57■□□□□ 0.24
CNTN3Q9P232 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CNTN3Q9P232 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNTN3Q9P232 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNTN3Q9P232 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.57■□□□□ 0.24
CNTN3Q9P232 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNTN3Q9P232 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNTN3Q9P232 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.57■□□□□ 0.24
CNTN3Q9P232 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
CNTN3Q9P232 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNTN3Q9P232 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CNTN3Q9P232 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CNTN3Q9P232 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNTN3Q9P232 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CNTN3Q9P232 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CNTN3Q9P232 AC087481.3-201ENST00000602886 1894 ntBASIC16.56■□□□□ 0.24
CNTN3Q9P232 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNTN3Q9P232 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNTN3Q9P232 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CNTN3Q9P232 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.56■□□□□ 0.24
CNTN3Q9P232 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
CNTN3Q9P232 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CNTN3Q9P232 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CNTN3Q9P232 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNTN3Q9P232 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.56■□□□□ 0.24
CNTN3Q9P232 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.56■□□□□ 0.24
CNTN3Q9P232 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.56■□□□□ 0.24
CNTN3Q9P232 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CNTN3Q9P232 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CNTN3Q9P232 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.56■□□□□ 0.24
CNTN3Q9P232 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNTN3Q9P232 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNTN3Q9P232 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.56■□□□□ 0.24
CNTN3Q9P232 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNTN3Q9P232 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.56■□□□□ 0.24
CNTN3Q9P232 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.56■□□□□ 0.24
CNTN3Q9P232 CNN2P8-201ENST00000421872 913 ntBASIC16.56■□□□□ 0.24
CNTN3Q9P232 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.56■□□□□ 0.24
CNTN3Q9P232 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CNTN3Q9P232 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.56■□□□□ 0.24
CNTN3Q9P232 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.56■□□□□ 0.24
CNTN3Q9P232 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.56■□□□□ 0.24
CNTN3Q9P232 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.56■□□□□ 0.24
CNTN3Q9P232 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.56■□□□□ 0.24
CNTN3Q9P232 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNTN3Q9P232 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNTN3Q9P232 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNTN3Q9P232 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
CNTN3Q9P232 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CNTN3Q9P232 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNTN3Q9P232 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNTN3Q9P232 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.56■□□□□ 0.24
CNTN3Q9P232 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNTN3Q9P232 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.56■□□□□ 0.24
CNTN3Q9P232 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CNTN3Q9P232 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNTN3Q9P232 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CNTN3Q9P232 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.56■□□□□ 0.24
CNTN3Q9P232 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CNTN3Q9P232 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.56■□□□□ 0.24
CNTN3Q9P232 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CNTN3Q9P232 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNTN3Q9P232 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CNTN3Q9P232 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CNTN3Q9P232 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNTN3Q9P232 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CNTN3Q9P232 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CNTN3Q9P232 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CNTN3Q9P232 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CNTN3Q9P232 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.55■□□□□ 0.24
CNTN3Q9P232 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
CNTN3Q9P232 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CNTN3Q9P232 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CNTN3Q9P232 CICP11-201ENST00000434745 2827 ntBASIC16.55■□□□□ 0.24
CNTN3Q9P232 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CNTN3Q9P232 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.55■□□□□ 0.24
CNTN3Q9P232 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CNTN3Q9P232 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CNTN3Q9P232 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.55■□□□□ 0.24
CNTN3Q9P232 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.55■□□□□ 0.24
CNTN3Q9P232 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.55■□□□□ 0.24
CNTN3Q9P232 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.55■□□□□ 0.24
CNTN3Q9P232 RPS2P32-201ENST00000439199 892 ntBASIC16.55■□□□□ 0.24
CNTN3Q9P232 AC007274.1-201ENST00000439805 662 ntBASIC16.55■□□□□ 0.24
CNTN3Q9P232 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.55■□□□□ 0.24
CNTN3Q9P232 FO681548.1-201ENST00000455617 1132 ntBASIC16.55■□□□□ 0.24
CNTN3Q9P232 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CNTN3Q9P232 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.55■□□□□ 0.24
CNTN3Q9P232 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.55■□□□□ 0.24
CNTN3Q9P232 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.55■□□□□ 0.24
CNTN3Q9P232 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.55■□□□□ 0.24
CNTN3Q9P232 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.55■□□□□ 0.24
CNTN3Q9P232 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.55■□□□□ 0.24
CNTN3Q9P232 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.55■□□□□ 0.24
CNTN3Q9P232 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CNTN3Q9P232 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms