Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
KCMF1Q9P0J7 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.69□□□□□ -0.06
KCMF1Q9P0J7 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
KCMF1Q9P0J7 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
KCMF1Q9P0J7 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
KCMF1Q9P0J7 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
KCMF1Q9P0J7 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
KCMF1Q9P0J7 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
KCMF1Q9P0J7 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
KCMF1Q9P0J7 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
KCMF1Q9P0J7 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
KCMF1Q9P0J7 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
KCMF1Q9P0J7 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
KCMF1Q9P0J7 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
KCMF1Q9P0J7 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.69□□□□□ -0.06
KCMF1Q9P0J7 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
KCMF1Q9P0J7 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
KCMF1Q9P0J7 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
KCMF1Q9P0J7 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
KCMF1Q9P0J7 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
KCMF1Q9P0J7 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 AL109954.1-202ENST00000564051 2148 ntBASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 CRB3P1-201ENST00000449338 276 ntBASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 AC055876.2-201ENST00000531834 546 ntBASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 AC036164.1-201ENST00000570544 333 ntBASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 AL132655.2-201ENST00000596276 594 ntBASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 CHCHD2P3-201ENST00000603038 451 ntBASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 AL662799.1-202ENST00000614205 422 ntBASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 AL391825.1-201ENST00000457671 1364 ntBASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 AC138035.3-201ENST00000622706 2791 ntBASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KCMF1Q9P0J7 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
KCMF1Q9P0J7 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
KCMF1Q9P0J7 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
KCMF1Q9P0J7 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.67□□□□□ -0.06
KCMF1Q9P0J7 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.67□□□□□ -0.06
KCMF1Q9P0J7 AC126365.1-201ENST00000578585 1514 ntBASIC14.67□□□□□ -0.06
KCMF1Q9P0J7 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.67□□□□□ -0.06
KCMF1Q9P0J7 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KCMF1Q9P0J7 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.67□□□□□ -0.06
KCMF1Q9P0J7 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
KCMF1Q9P0J7 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KCMF1Q9P0J7 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KCMF1Q9P0J7 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.67□□□□□ -0.06
KCMF1Q9P0J7 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
KCMF1Q9P0J7 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KCMF1Q9P0J7 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.67□□□□□ -0.06
KCMF1Q9P0J7 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
KCMF1Q9P0J7 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
KCMF1Q9P0J7 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
KCMF1Q9P0J7 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
KCMF1Q9P0J7 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
KCMF1Q9P0J7 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms