Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.14■□□□□ 0.33
BLOC1S4Q9NUP1 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.14■□□□□ 0.33
BLOC1S4Q9NUP1 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
BLOC1S4Q9NUP1 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BLOC1S4Q9NUP1 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
BLOC1S4Q9NUP1 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BLOC1S4Q9NUP1 AL360270.3-201ENST00000609118 1348 ntBASIC17.14■□□□□ 0.33
BLOC1S4Q9NUP1 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.14■□□□□ 0.33
BLOC1S4Q9NUP1 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
BLOC1S4Q9NUP1 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.14■□□□□ 0.33
BLOC1S4Q9NUP1 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
BLOC1S4Q9NUP1 AL158070.2-201ENST00000623713 1621 ntBASIC17.14■□□□□ 0.33
BLOC1S4Q9NUP1 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
BLOC1S4Q9NUP1 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BLOC1S4Q9NUP1 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 KRT8P22-201ENST00000562317 1415 ntBASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 RPL13AP25-201ENST00000484130 612 ntBASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 TERF1P3-201ENST00000505638 1227 ntBASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 SPDYE22P-201ENST00000582158 798 ntBASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 AC093813.1-201ENST00000605066 256 ntBASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BLOC1S4Q9NUP1 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 TP53TG3HP-202ENST00000569755 579 ntBASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms