Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 ARHGAP23P1-201ENST00000562773 1937 ntBASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 STK33-217ENST00000534493 1895 ntTSL 2 BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 AC073439.1-201ENST00000624121 1774 ntBASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 AP002414.3-201ENST00000589352 1468 ntBASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 PMS2P7-201ENST00000506558 1336 ntBASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 FAM8A3P-201ENST00000427218 844 ntBASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 AL645939.2-201ENST00000427340 991 ntBASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 PRSS29P-201ENST00000440800 595 ntBASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 HCG4P8-203ENST00000443049 980 ntBASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 AC109635.5-201ENST00000533593 962 ntBASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 AC002347.1-201ENST00000569543 541 ntBASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 MIR4751-201ENST00000578027 74 ntBASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 AL009183.1-201ENST00000603760 355 ntBASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 BEND3P1-201ENST00000421591 1944 ntBASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SND1-IT1Q9HBX3 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms