Protein–RNA interactions for Protein: Q9BZW5

TM6SF1, Transmembrane 6 superfamily member 1, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1Q9BZW5 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TM6SF1Q9BZW5 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC18.21■□□□□ 0.51
TM6SF1Q9BZW5 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
TM6SF1Q9BZW5 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TM6SF1Q9BZW5 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM6SF1Q9BZW5 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM6SF1Q9BZW5 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM6SF1Q9BZW5 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TM6SF1Q9BZW5 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TM6SF1Q9BZW5 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM6SF1Q9BZW5 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
TM6SF1Q9BZW5 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TM6SF1Q9BZW5 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM6SF1Q9BZW5 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TM6SF1Q9BZW5 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.2■□□□□ 0.5
TM6SF1Q9BZW5 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TM6SF1Q9BZW5 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.2■□□□□ 0.5
TM6SF1Q9BZW5 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TM6SF1Q9BZW5 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.2■□□□□ 0.5
TM6SF1Q9BZW5 INO80C-210ENST00000590757 595 ntTSL 2 BASIC18.2■□□□□ 0.5
TM6SF1Q9BZW5 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC18.2■□□□□ 0.5
TM6SF1Q9BZW5 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
TM6SF1Q9BZW5 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM6SF1Q9BZW5 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM6SF1Q9BZW5 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM6SF1Q9BZW5 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TM6SF1Q9BZW5 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM6SF1Q9BZW5 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM6SF1Q9BZW5 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TM6SF1Q9BZW5 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TM6SF1Q9BZW5 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM6SF1Q9BZW5 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM6SF1Q9BZW5 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC18.19■□□□□ 0.5
TM6SF1Q9BZW5 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM6SF1Q9BZW5 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC18.19■□□□□ 0.5
TM6SF1Q9BZW5 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM6SF1Q9BZW5 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM6SF1Q9BZW5 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM6SF1Q9BZW5 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM6SF1Q9BZW5 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM6SF1Q9BZW5 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM6SF1Q9BZW5 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM6SF1Q9BZW5 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM6SF1Q9BZW5 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.19■□□□□ 0.5
TM6SF1Q9BZW5 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM6SF1Q9BZW5 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TM6SF1Q9BZW5 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.19■□□□□ 0.5
TM6SF1Q9BZW5 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC18.19■□□□□ 0.5
TM6SF1Q9BZW5 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC18.19■□□□□ 0.5
TM6SF1Q9BZW5 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TM6SF1Q9BZW5 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.19■□□□□ 0.5
TM6SF1Q9BZW5 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.19■□□□□ 0.5
TM6SF1Q9BZW5 AL662799.1-202ENST00000614205 422 ntBASIC18.19■□□□□ 0.5
TM6SF1Q9BZW5 AC093512.1-201ENST00000617969 520 ntBASIC18.19■□□□□ 0.5
TM6SF1Q9BZW5 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.19■□□□□ 0.5
TM6SF1Q9BZW5 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
TM6SF1Q9BZW5 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TM6SF1Q9BZW5 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM6SF1Q9BZW5 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM6SF1Q9BZW5 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM6SF1Q9BZW5 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM6SF1Q9BZW5 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC18.18■□□□□ 0.5
TM6SF1Q9BZW5 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC18.18■□□□□ 0.5
TM6SF1Q9BZW5 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TM6SF1Q9BZW5 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM6SF1Q9BZW5 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TM6SF1Q9BZW5 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC18.18■□□□□ 0.5
TM6SF1Q9BZW5 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TM6SF1Q9BZW5 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TM6SF1Q9BZW5 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TM6SF1Q9BZW5 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM6SF1Q9BZW5 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.18■□□□□ 0.5
TM6SF1Q9BZW5 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TM6SF1Q9BZW5 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.18■□□□□ 0.5
TM6SF1Q9BZW5 AL353779.1-201ENST00000434793 351 ntBASIC18.18■□□□□ 0.5
TM6SF1Q9BZW5 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.18■□□□□ 0.5
TM6SF1Q9BZW5 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.18■□□□□ 0.5
TM6SF1Q9BZW5 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.18■□□□□ 0.5
TM6SF1Q9BZW5 FAM86LP-201ENST00000478302 853 ntBASIC18.18■□□□□ 0.5
TM6SF1Q9BZW5 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.18■□□□□ 0.5
TM6SF1Q9BZW5 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.18■□□□□ 0.5
TM6SF1Q9BZW5 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC18.18■□□□□ 0.5
TM6SF1Q9BZW5 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TM6SF1Q9BZW5 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.18■□□□□ 0.5
TM6SF1Q9BZW5 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM6SF1Q9BZW5 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM6SF1Q9BZW5 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TM6SF1Q9BZW5 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TM6SF1Q9BZW5 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM6SF1Q9BZW5 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
TM6SF1Q9BZW5 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM6SF1Q9BZW5 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.18■□□□□ 0.5
TM6SF1Q9BZW5 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM6SF1Q9BZW5 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM6SF1Q9BZW5 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM6SF1Q9BZW5 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM6SF1Q9BZW5 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM6SF1Q9BZW5 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM6SF1Q9BZW5 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TM6SF1Q9BZW5 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms