Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 AC025678.2-201ENST00000562061 970 ntBASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 LILRP1-201ENST00000444199 1370 ntBASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 AL360270.3-201ENST00000609118 1348 ntBASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 AC113367.3-201ENST00000508316 1912 ntBASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 MRPS18AP1-201ENST00000414458 589 ntBASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 AC004890.2-204ENST00000481968 304 ntBASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 SAMD11P1-201ENST00000571429 661 ntBASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RSPO3Q9BXY4 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms