Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 CYP4F24P-201ENST00000586049 1580 ntBASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 AC211486.1-202ENST00000416371 468 ntBASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 AC211476.1-201ENST00000503899 468 ntBASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 CALM1-205ENST00000553542 877 ntTSL 5 BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 COQ9-214ENST00000567933 882 ntTSL 3 BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 NAA38-207ENST00000576861 556 ntTSL 3 BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 AC004835.2-201ENST00000603762 682 ntBASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 AC092127.1-201ENST00000567093 3455 ntBASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 GPS2P2-201ENST00000430745 888 ntBASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 RBPMS2P1-201ENST00000437762 623 ntBASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 AC026979.3-201ENST00000607315 403 ntBASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CHRDL1Q9BU40 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms