Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.47□□□□□ -0.09
TM9SF2Q99805 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TM9SF2Q99805 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TM9SF2Q99805 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TM9SF2Q99805 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TM9SF2Q99805 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TM9SF2Q99805 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TM9SF2Q99805 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.46□□□□□ -0.09
TM9SF2Q99805 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TM9SF2Q99805 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TM9SF2Q99805 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
TM9SF2Q99805 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TM9SF2Q99805 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.46□□□□□ -0.09
TM9SF2Q99805 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TM9SF2Q99805 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TM9SF2Q99805 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.46□□□□□ -0.09
TM9SF2Q99805 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.46□□□□□ -0.09
TM9SF2Q99805 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.46□□□□□ -0.09
TM9SF2Q99805 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TM9SF2Q99805 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TM9SF2Q99805 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TM9SF2Q99805 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TM9SF2Q99805 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.46□□□□□ -0.09
TM9SF2Q99805 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.46□□□□□ -0.09
TM9SF2Q99805 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TM9SF2Q99805 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TM9SF2Q99805 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TM9SF2Q99805 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TM9SF2Q99805 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.46□□□□□ -0.09
TM9SF2Q99805 RPL37AP1-201ENST00000412502 279 ntBASIC14.46□□□□□ -0.09
TM9SF2Q99805 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.46□□□□□ -0.09
TM9SF2Q99805 AL139010.1-201ENST00000454878 894 ntBASIC14.46□□□□□ -0.09
TM9SF2Q99805 UGT1A2P-201ENST00000454886 866 ntBASIC14.46□□□□□ -0.09
TM9SF2Q99805 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TM9SF2Q99805 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.46□□□□□ -0.09
TM9SF2Q99805 BANF1P1-201ENST00000553684 263 ntBASIC14.46□□□□□ -0.09
TM9SF2Q99805 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.46□□□□□ -0.09
TM9SF2Q99805 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.46□□□□□ -0.09
TM9SF2Q99805 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TM9SF2Q99805 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.46□□□□□ -0.09
TM9SF2Q99805 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TM9SF2Q99805 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
TM9SF2Q99805 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TM9SF2Q99805 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TM9SF2Q99805 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.46□□□□□ -0.1
TM9SF2Q99805 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
TM9SF2Q99805 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.46□□□□□ -0.1
TM9SF2Q99805 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TM9SF2Q99805 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TM9SF2Q99805 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.1
TM9SF2Q99805 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TM9SF2Q99805 AC091951.1-201ENST00000512854 2465 ntBASIC14.46□□□□□ -0.1
TM9SF2Q99805 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TM9SF2Q99805 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.1
TM9SF2Q99805 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.45□□□□□ -0.1
TM9SF2Q99805 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.45□□□□□ -0.1
TM9SF2Q99805 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF2Q99805 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
TM9SF2Q99805 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.45□□□□□ -0.1
TM9SF2Q99805 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF2Q99805 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.45□□□□□ -0.1
TM9SF2Q99805 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF2Q99805 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.45□□□□□ -0.1
TM9SF2Q99805 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.45□□□□□ -0.1
TM9SF2Q99805 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF2Q99805 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF2Q99805 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF2Q99805 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF2Q99805 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF2Q99805 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF2Q99805 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF2Q99805 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF2Q99805 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TM9SF2Q99805 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF2Q99805 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.45□□□□□ -0.1
TM9SF2Q99805 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.45□□□□□ -0.1
TM9SF2Q99805 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.45□□□□□ -0.1
TM9SF2Q99805 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.45□□□□□ -0.1
TM9SF2Q99805 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF2Q99805 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.45□□□□□ -0.1
TM9SF2Q99805 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.45□□□□□ -0.1
TM9SF2Q99805 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
TM9SF2Q99805 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.45□□□□□ -0.1
TM9SF2Q99805 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.45□□□□□ -0.1
TM9SF2Q99805 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF2Q99805 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.45□□□□□ -0.1
TM9SF2Q99805 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
TM9SF2Q99805 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
TM9SF2Q99805 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.45□□□□□ -0.1
TM9SF2Q99805 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.45□□□□□ -0.1
TM9SF2Q99805 OR2I1P-209ENST00000641730 5365 ntBASIC14.45□□□□□ -0.1
TM9SF2Q99805 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TM9SF2Q99805 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF2Q99805 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
TM9SF2Q99805 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TM9SF2Q99805 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.44□□□□□ -0.1
TM9SF2Q99805 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TM9SF2Q99805 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
TM9SF2Q99805 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TM9SF2Q99805 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms