Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDC6Q99741 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CDC6Q99741 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC6Q99741 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC6Q99741 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.9□□□□□ -0.02
CDC6Q99741 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
CDC6Q99741 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDC6Q99741 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CDC6Q99741 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC6Q99741 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.9□□□□□ -0.02
CDC6Q99741 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC6Q99741 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.9□□□□□ -0.02
CDC6Q99741 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC6Q99741 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CDC6Q99741 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC6Q99741 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDC6Q99741 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC6Q99741 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC6Q99741 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC6Q99741 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDC6Q99741 ME2P1-201ENST00000426028 1970 ntBASIC14.89□□□□□ -0.03
CDC6Q99741 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC6Q99741 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.89□□□□□ -0.03
CDC6Q99741 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC6Q99741 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CDC6Q99741 AC008894.3-201ENST00000624324 3103 ntBASIC14.89□□□□□ -0.03
CDC6Q99741 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC6Q99741 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC6Q99741 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC6Q99741 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC6Q99741 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC6Q99741 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.89□□□□□ -0.03
CDC6Q99741 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC14.89□□□□□ -0.03
CDC6Q99741 FTLP1-201ENST00000449155 526 ntBASIC14.89□□□□□ -0.03
CDC6Q99741 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.89□□□□□ -0.03
CDC6Q99741 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.89□□□□□ -0.03
CDC6Q99741 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.89□□□□□ -0.03
CDC6Q99741 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
CDC6Q99741 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.89□□□□□ -0.03
CDC6Q99741 NAT9-224ENST00000583757 583 ntTSL 3 BASIC14.89□□□□□ -0.03
CDC6Q99741 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.89□□□□□ -0.03
CDC6Q99741 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CDC6Q99741 AC097724.1-201ENST00000609581 426 ntBASIC14.89□□□□□ -0.03
CDC6Q99741 ZACNP1-201ENST00000612259 710 ntBASIC14.89□□□□□ -0.03
CDC6Q99741 AC091544.8-201ENST00000619490 361 ntBASIC14.89□□□□□ -0.03
CDC6Q99741 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC6Q99741 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.89□□□□□ -0.03
CDC6Q99741 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC6Q99741 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDC6Q99741 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC6Q99741 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CDC6Q99741 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC6Q99741 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.89□□□□□ -0.03
CDC6Q99741 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC6Q99741 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC6Q99741 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC6Q99741 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC6Q99741 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.89□□□□□ -0.03
CDC6Q99741 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDC6Q99741 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC6Q99741 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
CDC6Q99741 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
CDC6Q99741 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC6Q99741 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CDC6Q99741 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CDC6Q99741 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CDC6Q99741 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDC6Q99741 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC6Q99741 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC6Q99741 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC6Q99741 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
CDC6Q99741 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDC6Q99741 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC6Q99741 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.88□□□□□ -0.03
CDC6Q99741 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDC6Q99741 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC6Q99741 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDC6Q99741 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CDC6Q99741 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC14.88□□□□□ -0.03
CDC6Q99741 NKAIN1P1-201ENST00000435754 582 ntBASIC14.88□□□□□ -0.03
CDC6Q99741 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.88□□□□□ -0.03
CDC6Q99741 SUPT4H1P2-201ENST00000501248 353 ntBASIC14.88□□□□□ -0.03
CDC6Q99741 AC044849.1-201ENST00000519737 1188 ntBASIC14.88□□□□□ -0.03
CDC6Q99741 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.88□□□□□ -0.03
CDC6Q99741 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC14.88□□□□□ -0.03
CDC6Q99741 PPY2P-201ENST00000582808 702 ntBASIC14.88□□□□□ -0.03
CDC6Q99741 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDC6Q99741 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC14.88□□□□□ -0.03
CDC6Q99741 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.88□□□□□ -0.03
CDC6Q99741 SPCS2P2-201ENST00000603270 608 ntBASIC14.88□□□□□ -0.03
CDC6Q99741 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDC6Q99741 AC100757.4-201ENST00000626934 759 ntBASIC14.88□□□□□ -0.03
CDC6Q99741 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDC6Q99741 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.88□□□□□ -0.03
CDC6Q99741 AC128714.1-201ENST00000637035 887 ntBASIC14.88□□□□□ -0.03
CDC6Q99741 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDC6Q99741 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.88□□□□□ -0.03
CDC6Q99741 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC6Q99741 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC6Q99741 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms