Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 AL121753.2-201ENST00000624581 1461 ntBASIC4.52□□□□□ -1.69
HMCN1Q96RW7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 PIFO-201ENST00000369737 746 ntTSL 2 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 AKR1C5P-201ENST00000427165 609 ntBASIC4.52□□□□□ -1.69
HMCN1Q96RW7 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 AC012513.2-201ENST00000441511 1137 ntBASIC4.52□□□□□ -1.69
HMCN1Q96RW7 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 SYNPR-AS1-201ENST00000488201 558 ntTSL 5 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 AL450346.2-201ENST00000495602 1024 ntBASIC4.52□□□□□ -1.69
HMCN1Q96RW7 RHEB-207ENST00000496004 744 ntTSL 2 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 AC108112.1-201ENST00000505567 659 ntTSL 5 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 AC023968.2-201ENST00000560593 1049 ntBASIC4.52□□□□□ -1.69
HMCN1Q96RW7 AL118522.1-201ENST00000611368 560 ntBASIC4.52□□□□□ -1.69
HMCN1Q96RW7 AC106782.5-201ENST00000616011 337 ntBASIC4.52□□□□□ -1.69
HMCN1Q96RW7 AC099552.4-201ENST00000624248 949 ntBASIC4.52□□□□□ -1.69
HMCN1Q96RW7 AC022532.1-201ENST00000624563 1728 ntBASIC4.52□□□□□ -1.69
HMCN1Q96RW7 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 IP6K2-219ENST00000446860 1565 ntTSL 2 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 AC018695.7-201ENST00000624587 2492 ntBASIC4.52□□□□□ -1.69
HMCN1Q96RW7 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 GH1-203ENST00000351388 685 ntTSL 2 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 B9D1-203ENST00000395615 805 ntTSL 3 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 EIF3FP3-201ENST00000434851 1086 ntBASIC4.52□□□□□ -1.69
HMCN1Q96RW7 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 KRT8P34-201ENST00000577607 1044 ntBASIC4.52□□□□□ -1.69
HMCN1Q96RW7 MIR3188-201ENST00000583494 85 ntBASIC4.52□□□□□ -1.69
HMCN1Q96RW7 SHMT1P1-201ENST00000419974 1312 ntBASIC4.52□□□□□ -1.69
HMCN1Q96RW7 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 AC020910.5-201ENST00000623668 1865 ntBASIC4.52□□□□□ -1.69
HMCN1Q96RW7 ZC3H8-201ENST00000272570 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 MFF-204ENST00000353339 2186 ntTSL 5 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 AC018629.1-201ENST00000623381 1736 ntBASIC4.52□□□□□ -1.69
HMCN1Q96RW7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 REXO1L5P-201ENST00000622260 2098 ntBASIC4.52□□□□□ -1.69
HMCN1Q96RW7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 AL603756.1-201ENST00000606511 2163 ntBASIC4.52□□□□□ -1.69
HMCN1Q96RW7 TEX38-201ENST00000334122 866 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 AC245100.5-201ENST00000452108 331 ntBASIC4.52□□□□□ -1.69
HMCN1Q96RW7 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 AC026434.2-201ENST00000506094 1078 ntBASIC4.52□□□□□ -1.69
HMCN1Q96RW7 FAM213AP2-201ENST00000521579 683 ntBASIC4.52□□□□□ -1.69
HMCN1Q96RW7 AC011306.1-201ENST00000606639 1275 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 MIR4726-201ENST00000615971 58 ntBASIC4.52□□□□□ -1.69
HMCN1Q96RW7 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms