Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BBS4Q96RK4 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BBS4Q96RK4 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BBS4Q96RK4 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.74□□□□□ -0.05
BBS4Q96RK4 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.74□□□□□ -0.05
BBS4Q96RK4 AC100757.3-201ENST00000622361 1406 ntBASIC14.74□□□□□ -0.05
BBS4Q96RK4 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.74□□□□□ -0.05
BBS4Q96RK4 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.74□□□□□ -0.05
BBS4Q96RK4 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.73□□□□□ -0.05
BBS4Q96RK4 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.73□□□□□ -0.05
BBS4Q96RK4 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.73□□□□□ -0.05
BBS4Q96RK4 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.73□□□□□ -0.05
BBS4Q96RK4 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
BBS4Q96RK4 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
BBS4Q96RK4 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
BBS4Q96RK4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
BBS4Q96RK4 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
BBS4Q96RK4 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
BBS4Q96RK4 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.73□□□□□ -0.05
BBS4Q96RK4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
BBS4Q96RK4 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BBS4Q96RK4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.73□□□□□ -0.05
BBS4Q96RK4 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
BBS4Q96RK4 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
BBS4Q96RK4 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
BBS4Q96RK4 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BBS4Q96RK4 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
BBS4Q96RK4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
BBS4Q96RK4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.73□□□□□ -0.05
BBS4Q96RK4 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
BBS4Q96RK4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.73□□□□□ -0.05
BBS4Q96RK4 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.73□□□□□ -0.05
BBS4Q96RK4 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.73□□□□□ -0.05
BBS4Q96RK4 AC015922.1-201ENST00000421102 1152 ntBASIC14.73□□□□□ -0.05
BBS4Q96RK4 AC092580.3-201ENST00000430932 139 ntBASIC14.73□□□□□ -0.05
BBS4Q96RK4 KRT18P64-201ENST00000434946 1219 ntBASIC14.73□□□□□ -0.05
BBS4Q96RK4 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
BBS4Q96RK4 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.73□□□□□ -0.05
BBS4Q96RK4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.73□□□□□ -0.05
BBS4Q96RK4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.73□□□□□ -0.05
BBS4Q96RK4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.73□□□□□ -0.05
BBS4Q96RK4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.73□□□□□ -0.05
BBS4Q96RK4 LINC01115-203ENST00000606068 577 ntBASIC14.73□□□□□ -0.05
BBS4Q96RK4 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BBS4Q96RK4 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
BBS4Q96RK4 AC006058.4-201ENST00000624016 1670 ntBASIC14.73□□□□□ -0.05
BBS4Q96RK4 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BBS4Q96RK4 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.73□□□□□ -0.05
BBS4Q96RK4 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
BBS4Q96RK4 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BBS4Q96RK4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
BBS4Q96RK4 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
BBS4Q96RK4 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
BBS4Q96RK4 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
BBS4Q96RK4 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.73□□□□□ -0.05
BBS4Q96RK4 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
BBS4Q96RK4 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
BBS4Q96RK4 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
BBS4Q96RK4 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.73□□□□□ -0.05
BBS4Q96RK4 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.73□□□□□ -0.05
BBS4Q96RK4 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
BBS4Q96RK4 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
BBS4Q96RK4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
BBS4Q96RK4 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
BBS4Q96RK4 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
BBS4Q96RK4 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BBS4Q96RK4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
BBS4Q96RK4 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
BBS4Q96RK4 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.72□□□□□ -0.05
BBS4Q96RK4 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
BBS4Q96RK4 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.72□□□□□ -0.05
BBS4Q96RK4 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
BBS4Q96RK4 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.72□□□□□ -0.05
BBS4Q96RK4 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BBS4Q96RK4 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
BBS4Q96RK4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
BBS4Q96RK4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
BBS4Q96RK4 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.72□□□□□ -0.05
BBS4Q96RK4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.72□□□□□ -0.05
BBS4Q96RK4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.72□□□□□ -0.05
BBS4Q96RK4 AC241585.1-201ENST00000433527 519 ntBASIC14.72□□□□□ -0.05
BBS4Q96RK4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.72□□□□□ -0.05
BBS4Q96RK4 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.72□□□□□ -0.05
BBS4Q96RK4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.72□□□□□ -0.05
BBS4Q96RK4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.72□□□□□ -0.05
BBS4Q96RK4 DUX4L27-201ENST00000554796 1261 ntBASIC14.72□□□□□ -0.05
BBS4Q96RK4 AC044860.1-202ENST00000559481 777 ntBASIC14.72□□□□□ -0.05
BBS4Q96RK4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.72□□□□□ -0.05
BBS4Q96RK4 AC006538.3-201ENST00000612495 578 ntBASIC14.72□□□□□ -0.05
BBS4Q96RK4 AL590560.3-201ENST00000623350 461 ntBASIC14.72□□□□□ -0.05
BBS4Q96RK4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
BBS4Q96RK4 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.72□□□□□ -0.05
BBS4Q96RK4 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BBS4Q96RK4 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
BBS4Q96RK4 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BBS4Q96RK4 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BBS4Q96RK4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
BBS4Q96RK4 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BBS4Q96RK4 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BBS4Q96RK4 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms