Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC85AQ96PX6 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC85AQ96PX6 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC85AQ96PX6 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC85AQ96PX6 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC85AQ96PX6 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC85AQ96PX6 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC85AQ96PX6 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC85AQ96PX6 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC85AQ96PX6 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
CCDC85AQ96PX6 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC85AQ96PX6 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
CCDC85AQ96PX6 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC85AQ96PX6 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC85AQ96PX6 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC85AQ96PX6 AL359258.3-201ENST00000622910 2331 ntBASIC19.12■□□□□ 0.65
CCDC85AQ96PX6 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC85AQ96PX6 AL513523.2-202ENST00000427283 2040 ntBASIC19.12■□□□□ 0.65
CCDC85AQ96PX6 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC85AQ96PX6 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC85AQ96PX6 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC85AQ96PX6 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC85AQ96PX6 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC85AQ96PX6 ACTBP8-201ENST00000403258 1108 ntBASIC19.12■□□□□ 0.65
CCDC85AQ96PX6 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC19.12■□□□□ 0.65
CCDC85AQ96PX6 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CCDC85AQ96PX6 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC85AQ96PX6 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC19.12■□□□□ 0.65
CCDC85AQ96PX6 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC19.12■□□□□ 0.65
CCDC85AQ96PX6 AC023310.1-201ENST00000554836 735 ntBASIC19.12■□□□□ 0.65
CCDC85AQ96PX6 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC19.12■□□□□ 0.65
CCDC85AQ96PX6 AC244093.1-201ENST00000610837 814 ntBASIC19.12■□□□□ 0.65
CCDC85AQ96PX6 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC85AQ96PX6 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC85AQ96PX6 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC85AQ96PX6 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CCDC85AQ96PX6 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC85AQ96PX6 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC85AQ96PX6 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
CCDC85AQ96PX6 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CCDC85AQ96PX6 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CCDC85AQ96PX6 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC85AQ96PX6 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 LRRC59-203ENST00000576448 1531 ntBASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 WARS-232ENST00000556645 2508 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 AHCYP2-201ENST00000430630 1300 ntBASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 FAM86HP-204ENST00000513466 959 ntBASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 ZNF767P-206ENST00000513792 565 ntBASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 RNA5SP486-201ENST00000515961 83 ntBASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 AC026691.1-201ENST00000602502 2017 ntBASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 AP005117.1-202ENST00000581724 1908 ntBASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC85AQ96PX6 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 CICP11-201ENST00000434745 2827 ntBASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC85AQ96PX6 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms