Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 TARDBPP1-201ENST00000442013 1203 ntBASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 AL589987.1-201ENST00000453380 819 ntBASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 AC036164.1-201ENST00000570544 333 ntBASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.4■□□□□ 0.06
SH3KBP1Q96B97 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.06
SH3KBP1Q96B97 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 AC144831.1-201ENST00000573312 2656 ntBASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 RPL13P2-201ENST00000440687 659 ntBASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 AC244107.1-201ENST00000442033 332 ntBASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 TMEM261P1-201ENST00000604899 340 ntBASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SH3KBP1Q96B97 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms