Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCLNQ969V3 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCLNQ969V3 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCLNQ969V3 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCLNQ969V3 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.12■□□□□ 0.01
NCLNQ969V3 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCLNQ969V3 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCLNQ969V3 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
NCLNQ969V3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCLNQ969V3 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCLNQ969V3 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NCLNQ969V3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCLNQ969V3 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCLNQ969V3 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCLNQ969V3 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCLNQ969V3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCLNQ969V3 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCLNQ969V3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCLNQ969V3 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCLNQ969V3 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCLNQ969V3 MIR943-201ENST00000401286 94 ntBASIC15.12■□□□□ 0.01
NCLNQ969V3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.12■□□□□ 0.01
NCLNQ969V3 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.12■□□□□ 0.01
NCLNQ969V3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCLNQ969V3 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.12■□□□□ 0.01
NCLNQ969V3 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCLNQ969V3 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCLNQ969V3 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCLNQ969V3 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.12■□□□□ 0.01
NCLNQ969V3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.12■□□□□ 0.01
NCLNQ969V3 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.12■□□□□ 0.01
NCLNQ969V3 AC140878.1-201ENST00000565277 250 ntBASIC15.12■□□□□ 0.01
NCLNQ969V3 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.12■□□□□ 0.01
NCLNQ969V3 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.12■□□□□ 0.01
NCLNQ969V3 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
NCLNQ969V3 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCLNQ969V3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.12■□□□□ 0.01
NCLNQ969V3 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCLNQ969V3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCLNQ969V3 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NCLNQ969V3 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.12■□□□□ 0.01
NCLNQ969V3 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.12■□□□□ 0.01
NCLNQ969V3 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.12■□□□□ 0.01
NCLNQ969V3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCLNQ969V3 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCLNQ969V3 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCLNQ969V3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCLNQ969V3 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCLNQ969V3 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCLNQ969V3 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
NCLNQ969V3 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCLNQ969V3 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCLNQ969V3 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCLNQ969V3 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.12■□□□□ 0.01
NCLNQ969V3 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.12■□□□□ 0.01
NCLNQ969V3 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCLNQ969V3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NCLNQ969V3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.12■□□□□ 0.01
NCLNQ969V3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.12■□□□□ 0.01
NCLNQ969V3 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCLNQ969V3 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCLNQ969V3 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NCLNQ969V3 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.11■□□□□ 0.01
NCLNQ969V3 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.11■□□□□ 0.01
NCLNQ969V3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.11■□□□□ 0.01
NCLNQ969V3 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
NCLNQ969V3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCLNQ969V3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NCLNQ969V3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NCLNQ969V3 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.11■□□□□ 0.01
NCLNQ969V3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
NCLNQ969V3 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCLNQ969V3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NCLNQ969V3 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.11■□□□□ 0.01
NCLNQ969V3 FAM45BP-202ENST00000592932 1624 ntBASIC15.11■□□□□ 0.01
NCLNQ969V3 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.11■□□□□ 0.01
NCLNQ969V3 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NCLNQ969V3 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCLNQ969V3 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NCLNQ969V3 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCLNQ969V3 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
NCLNQ969V3 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
NCLNQ969V3 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
NCLNQ969V3 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.11■□□□□ 0.01
NCLNQ969V3 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NCLNQ969V3 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.11■□□□□ 0.01
NCLNQ969V3 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.11■□□□□ 0.01
NCLNQ969V3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.11■□□□□ 0.01
NCLNQ969V3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.11■□□□□ 0.01
NCLNQ969V3 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCLNQ969V3 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.11■□□□□ 0.01
NCLNQ969V3 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCLNQ969V3 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.11■□□□□ 0.01
NCLNQ969V3 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.11■□□□□ 0.01
NCLNQ969V3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCLNQ969V3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCLNQ969V3 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
NCLNQ969V3 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCLNQ969V3 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NCLNQ969V3 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms