Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC13.24□□□□□ -0.29
USP9XQ93008 THY1-209ENST00000580275 578 ntTSL 3 BASIC13.24□□□□□ -0.29
USP9XQ93008 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC13.24□□□□□ -0.29
USP9XQ93008 AC103810.10-201ENST00000606504 343 ntBASIC13.24□□□□□ -0.29
USP9XQ93008 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
USP9XQ93008 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
USP9XQ93008 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC13.24□□□□□ -0.29
USP9XQ93008 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
USP9XQ93008 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
USP9XQ93008 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
USP9XQ93008 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC13.24□□□□□ -0.29
USP9XQ93008 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
USP9XQ93008 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
USP9XQ93008 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
USP9XQ93008 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.24□□□□□ -0.29
USP9XQ93008 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
USP9XQ93008 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
USP9XQ93008 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
USP9XQ93008 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
USP9XQ93008 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
USP9XQ93008 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
USP9XQ93008 KLF2P1-201ENST00000447438 1042 ntBASIC13.24□□□□□ -0.29
USP9XQ93008 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC13.24□□□□□ -0.29
USP9XQ93008 DUX4L46-201ENST00000566845 751 ntBASIC13.24□□□□□ -0.29
USP9XQ93008 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC13.24□□□□□ -0.29
USP9XQ93008 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
USP9XQ93008 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
USP9XQ93008 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.24□□□□□ -0.29
USP9XQ93008 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
USP9XQ93008 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
USP9XQ93008 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
USP9XQ93008 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
USP9XQ93008 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
USP9XQ93008 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.23□□□□□ -0.29
USP9XQ93008 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
USP9XQ93008 EML3-212ENST00000494176 2901 ntTSL 2 BASIC13.23□□□□□ -0.29
USP9XQ93008 EML3-216ENST00000529309 2909 ntTSL 2 BASIC13.23□□□□□ -0.29
USP9XQ93008 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
USP9XQ93008 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
USP9XQ93008 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.23□□□□□ -0.29
USP9XQ93008 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC13.23□□□□□ -0.29
USP9XQ93008 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
USP9XQ93008 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
USP9XQ93008 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
USP9XQ93008 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
USP9XQ93008 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
USP9XQ93008 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
USP9XQ93008 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC13.23□□□□□ -0.29
USP9XQ93008 GCSHP3-201ENST00000431120 391 ntBASIC13.23□□□□□ -0.29
USP9XQ93008 IGKV1OR-2-201ENST00000457995 350 ntBASIC13.23□□□□□ -0.29
USP9XQ93008 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
USP9XQ93008 AC004466.1-201ENST00000599515 1080 ntBASIC13.23□□□□□ -0.29
USP9XQ93008 AC011247.3-201ENST00000603297 438 ntBASIC13.23□□□□□ -0.29
USP9XQ93008 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
USP9XQ93008 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
USP9XQ93008 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.23□□□□□ -0.29
USP9XQ93008 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.23□□□□□ -0.29
USP9XQ93008 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
USP9XQ93008 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
USP9XQ93008 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
USP9XQ93008 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
USP9XQ93008 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
USP9XQ93008 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.23□□□□□ -0.29
USP9XQ93008 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
USP9XQ93008 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC13.23□□□□□ -0.29
USP9XQ93008 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.23□□□□□ -0.29
USP9XQ93008 SIGLEC20P-201ENST00000595243 1311 ntBASIC13.23□□□□□ -0.29
USP9XQ93008 AC011840.2-201ENST00000563063 1520 ntBASIC13.23□□□□□ -0.29
USP9XQ93008 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
USP9XQ93008 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
USP9XQ93008 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
USP9XQ93008 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC13.23□□□□□ -0.29
USP9XQ93008 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
USP9XQ93008 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.23□□□□□ -0.29
USP9XQ93008 AC239868.1-201ENST00000369385 493 ntBASIC13.23□□□□□ -0.29
USP9XQ93008 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.23□□□□□ -0.29
USP9XQ93008 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC13.23□□□□□ -0.29
USP9XQ93008 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
USP9XQ93008 MESTP3-201ENST00000503460 968 ntBASIC13.23□□□□□ -0.29
USP9XQ93008 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
USP9XQ93008 POLD4-208ENST00000532830 904 ntTSL 3 BASIC13.23□□□□□ -0.29
USP9XQ93008 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC13.23□□□□□ -0.29
USP9XQ93008 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC13.23□□□□□ -0.29
USP9XQ93008 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC13.23□□□□□ -0.29
USP9XQ93008 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.23□□□□□ -0.29
USP9XQ93008 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
USP9XQ93008 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC13.22□□□□□ -0.29
USP9XQ93008 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC13.22□□□□□ -0.29
USP9XQ93008 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
USP9XQ93008 LINC01815-202ENST00000641468 1409 ntBASIC13.22□□□□□ -0.29
USP9XQ93008 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
USP9XQ93008 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.22□□□□□ -0.29
USP9XQ93008 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
USP9XQ93008 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC13.22□□□□□ -0.29
USP9XQ93008 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
USP9XQ93008 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
USP9XQ93008 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
USP9XQ93008 Z98259.2-201ENST00000641583 609 ntBASIC13.22□□□□□ -0.29
USP9XQ93008 SHC1P1-201ENST00000425230 1745 ntBASIC13.22□□□□□ -0.29
USP9XQ93008 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms