Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP3S1Q92572 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP3S1Q92572 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC13.7□□□□□ -0.22
AP3S1Q92572 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.7□□□□□ -0.22
AP3S1Q92572 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.7□□□□□ -0.22
AP3S1Q92572 AL450472.2-201ENST00000603663 1156 ntBASIC13.7□□□□□ -0.22
AP3S1Q92572 AC138894.3-201ENST00000603787 634 ntBASIC13.7□□□□□ -0.22
AP3S1Q92572 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.7□□□□□ -0.22
AP3S1Q92572 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.7□□□□□ -0.22
AP3S1Q92572 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AP3S1Q92572 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.7□□□□□ -0.22
AP3S1Q92572 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.7□□□□□ -0.22
AP3S1Q92572 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.7□□□□□ -0.22
AP3S1Q92572 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.7□□□□□ -0.22
AP3S1Q92572 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
AP3S1Q92572 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP3S1Q92572 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP3S1Q92572 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP3S1Q92572 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP3S1Q92572 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.7□□□□□ -0.22
AP3S1Q92572 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP3S1Q92572 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP3S1Q92572 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S1Q92572 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.69□□□□□ -0.22
AP3S1Q92572 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.69□□□□□ -0.22
AP3S1Q92572 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
AP3S1Q92572 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S1Q92572 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S1Q92572 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S1Q92572 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.69□□□□□ -0.22
AP3S1Q92572 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.69□□□□□ -0.22
AP3S1Q92572 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
AP3S1Q92572 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
AP3S1Q92572 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S1Q92572 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.69□□□□□ -0.22
AP3S1Q92572 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S1Q92572 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S1Q92572 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.69□□□□□ -0.22
AP3S1Q92572 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.69□□□□□ -0.22
AP3S1Q92572 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
AP3S1Q92572 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S1Q92572 AP000867.3-201ENST00000524675 377 ntBASIC13.69□□□□□ -0.22
AP3S1Q92572 AL031432.2-201ENST00000566714 459 ntBASIC13.69□□□□□ -0.22
AP3S1Q92572 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.69□□□□□ -0.22
AP3S1Q92572 AL928711.1-201ENST00000570165 459 ntBASIC13.69□□□□□ -0.22
AP3S1Q92572 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC13.69□□□□□ -0.22
AP3S1Q92572 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.69□□□□□ -0.22
AP3S1Q92572 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.69□□□□□ -0.22
AP3S1Q92572 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.69□□□□□ -0.22
AP3S1Q92572 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.69□□□□□ -0.22
AP3S1Q92572 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S1Q92572 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S1Q92572 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
AP3S1Q92572 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.69□□□□□ -0.22
AP3S1Q92572 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
AP3S1Q92572 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S1Q92572 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S1Q92572 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S1Q92572 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
AP3S1Q92572 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S1Q92572 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S1Q92572 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S1Q92572 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S1Q92572 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S1Q92572 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S1Q92572 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.69□□□□□ -0.22
AP3S1Q92572 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP3S1Q92572 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
AP3S1Q92572 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
AP3S1Q92572 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
AP3S1Q92572 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.68□□□□□ -0.22
AP3S1Q92572 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S1Q92572 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.68□□□□□ -0.22
AP3S1Q92572 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S1Q92572 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
AP3S1Q92572 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S1Q92572 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S1Q92572 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
AP3S1Q92572 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S1Q92572 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S1Q92572 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S1Q92572 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S1Q92572 AC004987.2-201ENST00000395959 1148 ntBASIC13.68□□□□□ -0.22
AP3S1Q92572 FXN-203ENST00000396366 922 ntTSL 2 BASIC13.68□□□□□ -0.22
AP3S1Q92572 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.68□□□□□ -0.22
AP3S1Q92572 LAGE3P1-201ENST00000425356 484 ntBASIC13.68□□□□□ -0.22
AP3S1Q92572 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S1Q92572 AP002383.4-201ENST00000442518 975 ntBASIC13.68□□□□□ -0.22
AP3S1Q92572 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.68□□□□□ -0.22
AP3S1Q92572 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC13.68□□□□□ -0.22
AP3S1Q92572 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.68□□□□□ -0.22
AP3S1Q92572 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.68□□□□□ -0.22
AP3S1Q92572 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
AP3S1Q92572 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.68□□□□□ -0.22
AP3S1Q92572 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.68□□□□□ -0.22
AP3S1Q92572 AL078644.1-201ENST00000609881 752 ntBASIC13.68□□□□□ -0.22
AP3S1Q92572 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13.68□□□□□ -0.22
AP3S1Q92572 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S1Q92572 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S1Q92572 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms