Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LMO3Q8TAP4 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.5■□□□□ 0.23
LMO3Q8TAP4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LMO3Q8TAP4 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.5■□□□□ 0.23
LMO3Q8TAP4 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.5■□□□□ 0.23
LMO3Q8TAP4 AC120045.2-201ENST00000567334 178 ntBASIC16.5■□□□□ 0.23
LMO3Q8TAP4 AC093813.1-201ENST00000605066 256 ntBASIC16.5■□□□□ 0.23
LMO3Q8TAP4 AL355385.1-201ENST00000606123 409 ntBASIC16.5■□□□□ 0.23
LMO3Q8TAP4 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.5■□□□□ 0.23
LMO3Q8TAP4 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.5■□□□□ 0.23
LMO3Q8TAP4 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LMO3Q8TAP4 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LMO3Q8TAP4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LMO3Q8TAP4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LMO3Q8TAP4 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LMO3Q8TAP4 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.5■□□□□ 0.23
LMO3Q8TAP4 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
LMO3Q8TAP4 INTS4P2-202ENST00000614726 2019 ntBASIC16.5■□□□□ 0.23
LMO3Q8TAP4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
LMO3Q8TAP4 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.5■□□□□ 0.23
LMO3Q8TAP4 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LMO3Q8TAP4 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LMO3Q8TAP4 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LMO3Q8TAP4 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LMO3Q8TAP4 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.5■□□□□ 0.23
LMO3Q8TAP4 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LMO3Q8TAP4 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.49■□□□□ 0.23
LMO3Q8TAP4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LMO3Q8TAP4 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.49■□□□□ 0.23
LMO3Q8TAP4 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.49■□□□□ 0.23
LMO3Q8TAP4 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LMO3Q8TAP4 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LMO3Q8TAP4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LMO3Q8TAP4 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
LMO3Q8TAP4 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LMO3Q8TAP4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
LMO3Q8TAP4 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.49■□□□□ 0.23
LMO3Q8TAP4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LMO3Q8TAP4 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LMO3Q8TAP4 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LMO3Q8TAP4 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
LMO3Q8TAP4 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LMO3Q8TAP4 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.49■□□□□ 0.23
LMO3Q8TAP4 AC236430.1-201ENST00000402231 743 ntBASIC16.49■□□□□ 0.23
LMO3Q8TAP4 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LMO3Q8TAP4 AL442647.2-201ENST00000429864 857 ntBASIC16.49■□□□□ 0.23
LMO3Q8TAP4 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.49■□□□□ 0.23
LMO3Q8TAP4 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.49■□□□□ 0.23
LMO3Q8TAP4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LMO3Q8TAP4 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.49■□□□□ 0.23
LMO3Q8TAP4 AC123567.1-201ENST00000548294 1261 ntBASIC16.49■□□□□ 0.23
LMO3Q8TAP4 AL359711.2-201ENST00000563105 872 ntBASIC16.49■□□□□ 0.23
LMO3Q8TAP4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.49■□□□□ 0.23
LMO3Q8TAP4 TMEM261P1-201ENST00000604899 340 ntBASIC16.49■□□□□ 0.23
LMO3Q8TAP4 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.49■□□□□ 0.23
LMO3Q8TAP4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LMO3Q8TAP4 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LMO3Q8TAP4 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LMO3Q8TAP4 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LMO3Q8TAP4 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LMO3Q8TAP4 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LMO3Q8TAP4 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LMO3Q8TAP4 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LMO3Q8TAP4 AL391825.1-201ENST00000457671 1364 ntBASIC16.49■□□□□ 0.23
LMO3Q8TAP4 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LMO3Q8TAP4 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LMO3Q8TAP4 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LMO3Q8TAP4 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 AL645937.2-201ENST00000396808 931 ntBASIC16.48■□□□□ 0.23
LMO3Q8TAP4 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 RPL13AP25-201ENST00000484130 612 ntBASIC16.48■□□□□ 0.23
LMO3Q8TAP4 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms