Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 AC009118.2-201ENST00000613275 655 ntBASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 AC012645.4-201ENST00000610691 1061 ntBASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 REXO1L2P-201ENST00000425429 2069 ntBASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 AL359258.3-201ENST00000622910 2331 ntBASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
PCDH19Q8TAB3 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 AJ011931.1-201ENST00000618749 2492 ntBASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 AC005034.1-201ENST00000426657 489 ntBASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 AC023310.3-201ENST00000557027 670 ntBASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms