Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 AC148477.4-201ENST00000613430 1793 ntBASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 KRT18P64-201ENST00000434946 1219 ntBASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 MYO15B-237ENST00000642007 4893 ntBASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.29□□□□□ -0.44
TTC9CQ8N5M4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TTC9CQ8N5M4 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC12.28□□□□□ -0.44
TTC9CQ8N5M4 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TTC9CQ8N5M4 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TTC9CQ8N5M4 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
TTC9CQ8N5M4 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
TTC9CQ8N5M4 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TTC9CQ8N5M4 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
TTC9CQ8N5M4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC12.28□□□□□ -0.44
TTC9CQ8N5M4 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.28□□□□□ -0.44
TTC9CQ8N5M4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
TTC9CQ8N5M4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.28□□□□□ -0.44
TTC9CQ8N5M4 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TTC9CQ8N5M4 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
TTC9CQ8N5M4 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC12.28□□□□□ -0.44
TTC9CQ8N5M4 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
TTC9CQ8N5M4 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC12.28□□□□□ -0.44
TTC9CQ8N5M4 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TTC9CQ8N5M4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.28□□□□□ -0.44
TTC9CQ8N5M4 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TTC9CQ8N5M4 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TTC9CQ8N5M4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TTC9CQ8N5M4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
TTC9CQ8N5M4 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TTC9CQ8N5M4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
TTC9CQ8N5M4 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TTC9CQ8N5M4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.28□□□□□ -0.44
TTC9CQ8N5M4 TSSK5P-201ENST00000423978 907 ntBASIC12.28□□□□□ -0.44
TTC9CQ8N5M4 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms