Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 AC136759.1-202ENST00000530858 2194 ntBASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 LINC01165-201ENST00000445190 1623 ntBASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 LINC02199-201ENST00000506655 2702 ntBASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 GCOM2-201ENST00000509133 1104 ntBASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 NEU3-205ENST00000531619 582 ntTSL 5 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 AC090857.1-201ENST00000527400 390 ntBASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 AL353726.2-201ENST00000623259 884 ntBASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
COL27A1Q8IZC6 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 AC078991.1-201ENST00000437297 610 ntBASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 OR2R1P-201ENST00000441404 914 ntBASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 AC007881.3-201ENST00000608897 607 ntBASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL27A1Q8IZC6 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms