Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 KRT8P29-201ENST00000420409 1371 ntBASIC16.4■□□□□ 0.22
NPAS4Q8IUM7 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS4Q8IUM7 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS4Q8IUM7 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS4Q8IUM7 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS4Q8IUM7 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS4Q8IUM7 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS4Q8IUM7 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS4Q8IUM7 SPTLC1P5-201ENST00000450718 252 ntBASIC16.4■□□□□ 0.22
NPAS4Q8IUM7 AC005740.2-201ENST00000511085 419 ntBASIC16.4■□□□□ 0.22
NPAS4Q8IUM7 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.4■□□□□ 0.22
NPAS4Q8IUM7 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
NPAS4Q8IUM7 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.4■□□□□ 0.22
NPAS4Q8IUM7 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.4■□□□□ 0.22
NPAS4Q8IUM7 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
NPAS4Q8IUM7 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.4■□□□□ 0.22
NPAS4Q8IUM7 CU633904.3-201ENST00000624042 1029 ntBASIC16.4■□□□□ 0.22
NPAS4Q8IUM7 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS4Q8IUM7 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS4Q8IUM7 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS4Q8IUM7 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS4Q8IUM7 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.4■□□□□ 0.22
NPAS4Q8IUM7 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS4Q8IUM7 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS4Q8IUM7 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS4Q8IUM7 KRT8P19-201ENST00000551916 1455 ntBASIC16.4■□□□□ 0.22
NPAS4Q8IUM7 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS4Q8IUM7 AC092127.1-201ENST00000567093 3455 ntBASIC16.4■□□□□ 0.22
NPAS4Q8IUM7 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
NPAS4Q8IUM7 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.4■□□□□ 0.22
NPAS4Q8IUM7 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS4Q8IUM7 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS4Q8IUM7 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS4Q8IUM7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS4Q8IUM7 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS4Q8IUM7 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
NPAS4Q8IUM7 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
NPAS4Q8IUM7 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.39■□□□□ 0.21
NPAS4Q8IUM7 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPAS4Q8IUM7 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
NPAS4Q8IUM7 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.39■□□□□ 0.21
NPAS4Q8IUM7 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.39■□□□□ 0.21
NPAS4Q8IUM7 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPAS4Q8IUM7 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPAS4Q8IUM7 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPAS4Q8IUM7 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPAS4Q8IUM7 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NPAS4Q8IUM7 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NPAS4Q8IUM7 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NPAS4Q8IUM7 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
NPAS4Q8IUM7 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.39■□□□□ 0.21
NPAS4Q8IUM7 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.39■□□□□ 0.21
NPAS4Q8IUM7 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.39■□□□□ 0.21
NPAS4Q8IUM7 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.39■□□□□ 0.21
NPAS4Q8IUM7 AC021723.1-201ENST00000486306 515 ntBASIC16.39■□□□□ 0.21
NPAS4Q8IUM7 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPAS4Q8IUM7 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.39■□□□□ 0.21
NPAS4Q8IUM7 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.39■□□□□ 0.21
NPAS4Q8IUM7 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPAS4Q8IUM7 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPAS4Q8IUM7 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.39■□□□□ 0.21
NPAS4Q8IUM7 AC004466.1-201ENST00000599515 1080 ntBASIC16.39■□□□□ 0.21
NPAS4Q8IUM7 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.39■□□□□ 0.21
NPAS4Q8IUM7 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.39■□□□□ 0.21
NPAS4Q8IUM7 AP001505.2-201ENST00000616815 443 ntBASIC16.39■□□□□ 0.21
NPAS4Q8IUM7 AC022748.3-201ENST00000621828 275 ntBASIC16.39■□□□□ 0.21
NPAS4Q8IUM7 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.39■□□□□ 0.21
NPAS4Q8IUM7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
NPAS4Q8IUM7 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.39■□□□□ 0.21
NPAS4Q8IUM7 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPAS4Q8IUM7 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPAS4Q8IUM7 TUBBP5-203ENST00000508529 1334 ntBASIC16.39■□□□□ 0.21
NPAS4Q8IUM7 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.39■□□□□ 0.21
NPAS4Q8IUM7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NPAS4Q8IUM7 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 AL133466.1-201ENST00000447582 150 ntBASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 AC245884.6-201ENST00000515672 1067 ntBASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms