Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.08□□□□□ -0.16
SHFQ7M4L6 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
SHFQ7M4L6 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHFQ7M4L6 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SHFQ7M4L6 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SHFQ7M4L6 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SHFQ7M4L6 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHFQ7M4L6 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHFQ7M4L6 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHFQ7M4L6 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
SHFQ7M4L6 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SHFQ7M4L6 CYP4F24P-201ENST00000586049 1580 ntBASIC14.08□□□□□ -0.16
SHFQ7M4L6 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SHFQ7M4L6 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SHFQ7M4L6 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.08□□□□□ -0.16
SHFQ7M4L6 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SHFQ7M4L6 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SHFQ7M4L6 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SHFQ7M4L6 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHFQ7M4L6 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SHFQ7M4L6 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SHFQ7M4L6 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHFQ7M4L6 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SHFQ7M4L6 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SHFQ7M4L6 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SHFQ7M4L6 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SHFQ7M4L6 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SHFQ7M4L6 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SHFQ7M4L6 KRT8P37-201ENST00000451609 1420 ntBASIC14.07□□□□□ -0.16
SHFQ7M4L6 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHFQ7M4L6 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHFQ7M4L6 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.07□□□□□ -0.16
SHFQ7M4L6 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHFQ7M4L6 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SHFQ7M4L6 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHFQ7M4L6 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.07□□□□□ -0.16
SHFQ7M4L6 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHFQ7M4L6 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHFQ7M4L6 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHFQ7M4L6 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHFQ7M4L6 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHFQ7M4L6 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHFQ7M4L6 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHFQ7M4L6 MIR346-201ENST00000362234 95 ntBASIC14.07□□□□□ -0.16
SHFQ7M4L6 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHFQ7M4L6 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SHFQ7M4L6 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SHFQ7M4L6 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.07□□□□□ -0.16
SHFQ7M4L6 FDX1P1-201ENST00000449115 551 ntBASIC14.07□□□□□ -0.16
SHFQ7M4L6 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SHFQ7M4L6 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
SHFQ7M4L6 PHKG1P2-201ENST00000457537 863 ntBASIC14.07□□□□□ -0.16
SHFQ7M4L6 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.07□□□□□ -0.16
SHFQ7M4L6 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHFQ7M4L6 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.07□□□□□ -0.16
SHFQ7M4L6 AP000842.3-202ENST00000569238 1080 ntBASIC14.07□□□□□ -0.16
SHFQ7M4L6 AC026120.1-201ENST00000611536 926 ntBASIC14.07□□□□□ -0.16
SHFQ7M4L6 AC120114.3-201ENST00000611923 658 ntBASIC14.07□□□□□ -0.16
SHFQ7M4L6 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SHFQ7M4L6 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.07□□□□□ -0.16
SHFQ7M4L6 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SHFQ7M4L6 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHFQ7M4L6 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SHFQ7M4L6 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHFQ7M4L6 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.07□□□□□ -0.16
SHFQ7M4L6 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHFQ7M4L6 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.07□□□□□ -0.16
SHFQ7M4L6 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHFQ7M4L6 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHFQ7M4L6 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.06□□□□□ -0.16
SHFQ7M4L6 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.06□□□□□ -0.16
SHFQ7M4L6 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHFQ7M4L6 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHFQ7M4L6 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHFQ7M4L6 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHFQ7M4L6 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SHFQ7M4L6 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHFQ7M4L6 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.06□□□□□ -0.16
SHFQ7M4L6 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHFQ7M4L6 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHFQ7M4L6 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.06□□□□□ -0.16
SHFQ7M4L6 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.06□□□□□ -0.16
SHFQ7M4L6 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHFQ7M4L6 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SHFQ7M4L6 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHFQ7M4L6 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHFQ7M4L6 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.06□□□□□ -0.16
SHFQ7M4L6 ACTG1P14-201ENST00000446382 1122 ntBASIC14.06□□□□□ -0.16
SHFQ7M4L6 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SHFQ7M4L6 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.06□□□□□ -0.16
SHFQ7M4L6 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHFQ7M4L6 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.06□□□□□ -0.16
SHFQ7M4L6 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHFQ7M4L6 HNRNPUP1-201ENST00000554987 333 ntBASIC14.06□□□□□ -0.16
SHFQ7M4L6 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.06□□□□□ -0.16
SHFQ7M4L6 AC243562.1-201ENST00000560672 389 ntBASIC14.06□□□□□ -0.16
SHFQ7M4L6 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.06□□□□□ -0.16
SHFQ7M4L6 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHFQ7M4L6 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.06□□□□□ -0.16
SHFQ7M4L6 AC092902.6-201ENST00000641783 218 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms