Protein–RNA interactions for Protein: Q6XYD6

BRD3OS, BRD3 opposite strand, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3OSQ6XYD6 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
BRD3OSQ6XYD6 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
BRD3OSQ6XYD6 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
BRD3OSQ6XYD6 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
BRD3OSQ6XYD6 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
BRD3OSQ6XYD6 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
BRD3OSQ6XYD6 AL513523.2-202ENST00000427283 2040 ntBASIC12.52□□□□□ -0.4
BRD3OSQ6XYD6 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
BRD3OSQ6XYD6 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
BRD3OSQ6XYD6 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.52□□□□□ -0.4
BRD3OSQ6XYD6 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
BRD3OSQ6XYD6 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.52□□□□□ -0.4
BRD3OSQ6XYD6 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
BRD3OSQ6XYD6 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC12.52□□□□□ -0.4
BRD3OSQ6XYD6 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 AC009090.5-201ENST00000624886 2285 ntBASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 FAM86MP-201ENST00000340703 885 ntBASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 FAM21FP-201ENST00000426241 1131 ntBASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 KRT90P-201ENST00000549264 1064 ntBASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 GNRHR2-203ENST00000581100 1187 ntBASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 AP005019.2-201ENST00000615104 511 ntBASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 KRT8P35-201ENST00000483942 1338 ntBASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 AL391005.1-201ENST00000623953 2435 ntBASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 DOC2GP-204ENST00000639052 2548 ntBASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 AC008894.3-201ENST00000624324 3103 ntBASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC12.52□□□□□ -0.41
BRD3OSQ6XYD6 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
BRD3OSQ6XYD6 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
BRD3OSQ6XYD6 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BRD3OSQ6XYD6 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
BRD3OSQ6XYD6 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC12.51□□□□□ -0.41
BRD3OSQ6XYD6 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BRD3OSQ6XYD6 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BRD3OSQ6XYD6 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
BRD3OSQ6XYD6 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
BRD3OSQ6XYD6 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BRD3OSQ6XYD6 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
BRD3OSQ6XYD6 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BRD3OSQ6XYD6 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
BRD3OSQ6XYD6 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
BRD3OSQ6XYD6 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
BRD3OSQ6XYD6 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BRD3OSQ6XYD6 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BRD3OSQ6XYD6 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
BRD3OSQ6XYD6 RNU1-114P-201ENST00000365297 166 ntBASIC12.51□□□□□ -0.41
BRD3OSQ6XYD6 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BRD3OSQ6XYD6 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms