Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHC4Q6S5L8 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC17.44■□□□□ 0.38
SHC4Q6S5L8 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SHC4Q6S5L8 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
SHC4Q6S5L8 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHC4Q6S5L8 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SHC4Q6S5L8 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SHC4Q6S5L8 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SHC4Q6S5L8 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHC4Q6S5L8 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.44■□□□□ 0.38
SHC4Q6S5L8 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.44■□□□□ 0.38
SHC4Q6S5L8 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.44■□□□□ 0.38
SHC4Q6S5L8 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.44■□□□□ 0.38
SHC4Q6S5L8 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
SHC4Q6S5L8 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.44■□□□□ 0.38
SHC4Q6S5L8 AL589987.1-201ENST00000453380 819 ntBASIC17.44■□□□□ 0.38
SHC4Q6S5L8 AC067863.1-201ENST00000494933 530 ntBASIC17.44■□□□□ 0.38
SHC4Q6S5L8 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SHC4Q6S5L8 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SHC4Q6S5L8 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.44■□□□□ 0.38
SHC4Q6S5L8 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.44■□□□□ 0.38
SHC4Q6S5L8 AL158212.4-201ENST00000624062 1286 ntBASIC17.44■□□□□ 0.38
SHC4Q6S5L8 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.44■□□□□ 0.38
SHC4Q6S5L8 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.44■□□□□ 0.38
SHC4Q6S5L8 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SHC4Q6S5L8 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.44■□□□□ 0.38
SHC4Q6S5L8 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHC4Q6S5L8 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SHC4Q6S5L8 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHC4Q6S5L8 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SHC4Q6S5L8 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SHC4Q6S5L8 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHC4Q6S5L8 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SHC4Q6S5L8 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHC4Q6S5L8 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SHC4Q6S5L8 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SHC4Q6S5L8 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHC4Q6S5L8 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHC4Q6S5L8 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.43■□□□□ 0.38
SHC4Q6S5L8 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHC4Q6S5L8 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHC4Q6S5L8 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHC4Q6S5L8 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC17.43■□□□□ 0.38
SHC4Q6S5L8 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SHC4Q6S5L8 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHC4Q6S5L8 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHC4Q6S5L8 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHC4Q6S5L8 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SHC4Q6S5L8 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHC4Q6S5L8 MIR943-201ENST00000401286 94 ntBASIC17.43■□□□□ 0.38
SHC4Q6S5L8 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.43■□□□□ 0.38
SHC4Q6S5L8 FAM86GP-201ENST00000448322 971 ntBASIC17.43■□□□□ 0.38
SHC4Q6S5L8 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHC4Q6S5L8 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.43■□□□□ 0.38
SHC4Q6S5L8 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHC4Q6S5L8 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.43■□□□□ 0.38
SHC4Q6S5L8 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SHC4Q6S5L8 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.43■□□□□ 0.38
SHC4Q6S5L8 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHC4Q6S5L8 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHC4Q6S5L8 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHC4Q6S5L8 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHC4Q6S5L8 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SHC4Q6S5L8 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHC4Q6S5L8 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.43■□□□□ 0.38
SHC4Q6S5L8 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.43■□□□□ 0.38
SHC4Q6S5L8 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHC4Q6S5L8 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SHC4Q6S5L8 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHC4Q6S5L8 USP28-214ENST00000545540 3431 ntTSL 2 BASIC17.43■□□□□ 0.38
SHC4Q6S5L8 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SHC4Q6S5L8 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHC4Q6S5L8 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SHC4Q6S5L8 AC018529.2-202ENST00000611482 3087 ntBASIC17.42■□□□□ 0.38
SHC4Q6S5L8 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHC4Q6S5L8 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHC4Q6S5L8 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHC4Q6S5L8 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SHC4Q6S5L8 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHC4Q6S5L8 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHC4Q6S5L8 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHC4Q6S5L8 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SHC4Q6S5L8 MTHFR-210ENST00000641407 2387 ntBASIC17.42■□□□□ 0.38
SHC4Q6S5L8 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SHC4Q6S5L8 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.42■□□□□ 0.38
SHC4Q6S5L8 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SHC4Q6S5L8 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.42■□□□□ 0.38
SHC4Q6S5L8 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.42■□□□□ 0.38
SHC4Q6S5L8 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.42■□□□□ 0.38
SHC4Q6S5L8 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.42■□□□□ 0.38
SHC4Q6S5L8 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
SHC4Q6S5L8 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.42■□□□□ 0.38
SHC4Q6S5L8 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.42■□□□□ 0.38
SHC4Q6S5L8 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SHC4Q6S5L8 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHC4Q6S5L8 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHC4Q6S5L8 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHC4Q6S5L8 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHC4Q6S5L8 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SHC4Q6S5L8 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms