Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.26■□□□□ 0.19
FOXR1Q6PIV2 USP31-203ENST00000567975 2142 ntTSL 2 BASIC16.25■□□□□ 0.19
FOXR1Q6PIV2 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FOXR1Q6PIV2 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXR1Q6PIV2 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXR1Q6PIV2 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.25■□□□□ 0.19
FOXR1Q6PIV2 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXR1Q6PIV2 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXR1Q6PIV2 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.25■□□□□ 0.19
FOXR1Q6PIV2 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
FOXR1Q6PIV2 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXR1Q6PIV2 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXR1Q6PIV2 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXR1Q6PIV2 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FOXR1Q6PIV2 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXR1Q6PIV2 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FOXR1Q6PIV2 BASP1P1-201ENST00000430708 665 ntBASIC16.25■□□□□ 0.19
FOXR1Q6PIV2 RBPMS2P1-201ENST00000437762 623 ntBASIC16.25■□□□□ 0.19
FOXR1Q6PIV2 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.25■□□□□ 0.19
FOXR1Q6PIV2 RN7SL589P-201ENST00000481268 310 ntBASIC16.25■□□□□ 0.19
FOXR1Q6PIV2 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.25■□□□□ 0.19
FOXR1Q6PIV2 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.25■□□□□ 0.19
FOXR1Q6PIV2 AL135744.1-201ENST00000565098 629 ntBASIC16.25■□□□□ 0.19
FOXR1Q6PIV2 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.25■□□□□ 0.19
FOXR1Q6PIV2 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.25■□□□□ 0.19
FOXR1Q6PIV2 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.25■□□□□ 0.19
FOXR1Q6PIV2 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.25■□□□□ 0.19
FOXR1Q6PIV2 AJ011932.1-201ENST00000621707 465 ntBASIC16.25■□□□□ 0.19
FOXR1Q6PIV2 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FOXR1Q6PIV2 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXR1Q6PIV2 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FOXR1Q6PIV2 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXR1Q6PIV2 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXR1Q6PIV2 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FOXR1Q6PIV2 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXR1Q6PIV2 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXR1Q6PIV2 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
FOXR1Q6PIV2 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FOXR1Q6PIV2 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXR1Q6PIV2 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 TUBB3P1-201ENST00000405796 1332 ntBASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 GPAA1P2-202ENST00000606848 1787 ntBASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 AC190387.1-201ENST00000551683 408 ntBASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
FOXR1Q6PIV2 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms