Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TTC39BQ5VTQ0 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TTC39BQ5VTQ0 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
TTC39BQ5VTQ0 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC39BQ5VTQ0 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.16■□□□□ 0.18
TTC39BQ5VTQ0 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
TTC39BQ5VTQ0 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC39BQ5VTQ0 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TTC39BQ5VTQ0 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.16■□□□□ 0.18
TTC39BQ5VTQ0 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TTC39BQ5VTQ0 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TTC39BQ5VTQ0 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC39BQ5VTQ0 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.16■□□□□ 0.18
TTC39BQ5VTQ0 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.16■□□□□ 0.18
TTC39BQ5VTQ0 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.16■□□□□ 0.18
TTC39BQ5VTQ0 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.16■□□□□ 0.18
TTC39BQ5VTQ0 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.16■□□□□ 0.18
TTC39BQ5VTQ0 AC123567.1-201ENST00000548294 1261 ntBASIC16.16■□□□□ 0.18
TTC39BQ5VTQ0 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.16■□□□□ 0.18
TTC39BQ5VTQ0 AC000095.1-201ENST00000603208 874 ntBASIC16.16■□□□□ 0.18
TTC39BQ5VTQ0 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TTC39BQ5VTQ0 AC105233.6-201ENST00000642093 218 ntBASIC16.16■□□□□ 0.18
TTC39BQ5VTQ0 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC39BQ5VTQ0 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC39BQ5VTQ0 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.16■□□□□ 0.18
TTC39BQ5VTQ0 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC39BQ5VTQ0 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC39BQ5VTQ0 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.16■□□□□ 0.18
TTC39BQ5VTQ0 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.16■□□□□ 0.18
TTC39BQ5VTQ0 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TTC39BQ5VTQ0 LINC02228-204ENST00000642115 2962 ntBASIC16.16■□□□□ 0.18
TTC39BQ5VTQ0 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.16■□□□□ 0.18
TTC39BQ5VTQ0 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TTC39BQ5VTQ0 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC39BQ5VTQ0 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
TTC39BQ5VTQ0 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.15■□□□□ 0.18
TTC39BQ5VTQ0 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC39BQ5VTQ0 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC39BQ5VTQ0 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TTC39BQ5VTQ0 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC39BQ5VTQ0 AC126755.1-201ENST00000525846 6405 ntBASIC16.15■□□□□ 0.18
TTC39BQ5VTQ0 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.15■□□□□ 0.18
TTC39BQ5VTQ0 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.15■□□□□ 0.18
TTC39BQ5VTQ0 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.15■□□□□ 0.18
TTC39BQ5VTQ0 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TTC39BQ5VTQ0 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC39BQ5VTQ0 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC39BQ5VTQ0 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TTC39BQ5VTQ0 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC39BQ5VTQ0 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.15■□□□□ 0.18
TTC39BQ5VTQ0 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.15■□□□□ 0.18
TTC39BQ5VTQ0 RN7SL399P-201ENST00000471648 279 ntBASIC16.15■□□□□ 0.18
TTC39BQ5VTQ0 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.15■□□□□ 0.18
TTC39BQ5VTQ0 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC39BQ5VTQ0 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC39BQ5VTQ0 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.15■□□□□ 0.18
TTC39BQ5VTQ0 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.15■□□□□ 0.18
TTC39BQ5VTQ0 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC39BQ5VTQ0 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TTC39BQ5VTQ0 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TTC39BQ5VTQ0 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC39BQ5VTQ0 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC39BQ5VTQ0 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.15■□□□□ 0.18
TTC39BQ5VTQ0 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
TTC39BQ5VTQ0 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.15■□□□□ 0.18
TTC39BQ5VTQ0 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC39BQ5VTQ0 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC39BQ5VTQ0 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.14■□□□□ 0.18
TTC39BQ5VTQ0 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TTC39BQ5VTQ0 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TTC39BQ5VTQ0 AL121723.1-201ENST00000445194 1519 ntBASIC16.14■□□□□ 0.18
TTC39BQ5VTQ0 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 AC098614.1-201ENST00000368528 745 ntBASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 MYCLP2-201ENST00000449268 967 ntBASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 RPL13AP25-201ENST00000484130 612 ntBASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 AC015910.1-201ENST00000579400 975 ntBASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 CHCHD2P3-201ENST00000603038 451 ntBASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 TMEM261P1-201ENST00000604899 340 ntBASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 AC008494.3-201ENST00000606615 944 ntBASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 FAM45BP-202ENST00000592932 1624 ntBASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms