Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.02■□□□□ -0
RNF220Q5VTB9 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.02■□□□□ -0
RNF220Q5VTB9 BX640515.1-201ENST00000617215 977 ntBASIC15.02■□□□□ -0
RNF220Q5VTB9 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
RNF220Q5VTB9 AC097376.2-205ENST00000610159 5334 ntBASIC15.02□□□□□ -0.01
RNF220Q5VTB9 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
RNF220Q5VTB9 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RNF220Q5VTB9 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.02□□□□□ -0.01
RNF220Q5VTB9 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RNF220Q5VTB9 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RNF220Q5VTB9 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.02□□□□□ -0.01
RNF220Q5VTB9 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RNF220Q5VTB9 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RNF220Q5VTB9 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
RNF220Q5VTB9 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 SLC6A6P1-201ENST00000413933 1850 ntBASIC15.01□□□□□ -0.01
RNF220Q5VTB9 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 AC002056.1-201ENST00000395613 760 ntBASIC15.01□□□□□ -0.01
RNF220Q5VTB9 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 RNA5SP416-201ENST00000516838 111 ntBASIC15.01□□□□□ -0.01
RNF220Q5VTB9 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 INTS4P1-203ENST00000641008 3683 ntBASIC15.01□□□□□ -0.01
RNF220Q5VTB9 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF220Q5VTB9 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RNF220Q5VTB9 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNF220Q5VTB9 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15□□□□□ -0.01
RNF220Q5VTB9 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC15□□□□□ -0.01
RNF220Q5VTB9 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15□□□□□ -0.01
RNF220Q5VTB9 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC15□□□□□ -0.01
RNF220Q5VTB9 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
RNF220Q5VTB9 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
RNF220Q5VTB9 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNF220Q5VTB9 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15□□□□□ -0.01
RNF220Q5VTB9 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNF220Q5VTB9 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNF220Q5VTB9 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15□□□□□ -0.01
RNF220Q5VTB9 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RNF220Q5VTB9 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RNF220Q5VTB9 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNF220Q5VTB9 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
RNF220Q5VTB9 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15□□□□□ -0.01
RNF220Q5VTB9 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15□□□□□ -0.01
RNF220Q5VTB9 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15□□□□□ -0.01
RNF220Q5VTB9 PRYP6-201ENST00000514804 343 ntBASIC15□□□□□ -0.01
RNF220Q5VTB9 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15□□□□□ -0.01
RNF220Q5VTB9 AC002347.1-201ENST00000569543 541 ntBASIC15□□□□□ -0.01
RNF220Q5VTB9 AP002472.1-201ENST00000577490 586 ntBASIC15□□□□□ -0.01
RNF220Q5VTB9 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15□□□□□ -0.01
RNF220Q5VTB9 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15□□□□□ -0.01
RNF220Q5VTB9 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNF220Q5VTB9 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNF220Q5VTB9 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNF220Q5VTB9 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNF220Q5VTB9 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNF220Q5VTB9 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RNF220Q5VTB9 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
RNF220Q5VTB9 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC15□□□□□ -0.01
RNF220Q5VTB9 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms