Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC22.77■■□□□ 1.24
CDC42BPAQ5VT25 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
CDC42BPAQ5VT25 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC22.77■■□□□ 1.24
CDC42BPAQ5VT25 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CDC42BPAQ5VT25 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
CDC42BPAQ5VT25 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC22.77■■□□□ 1.24
CDC42BPAQ5VT25 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
CDC42BPAQ5VT25 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC22.77■■□□□ 1.24
CDC42BPAQ5VT25 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC22.77■■□□□ 1.24
CDC42BPAQ5VT25 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC22.77■■□□□ 1.24
CDC42BPAQ5VT25 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CDC42BPAQ5VT25 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
CDC42BPAQ5VT25 AC112693.3-201ENST00000624819 1983 ntBASIC22.77■■□□□ 1.24
CDC42BPAQ5VT25 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
CDC42BPAQ5VT25 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CDC42BPAQ5VT25 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CDC42BPAQ5VT25 AC087481.3-201ENST00000602886 1894 ntBASIC22.77■■□□□ 1.24
CDC42BPAQ5VT25 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CDC42BPAQ5VT25 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC22.77■■□□□ 1.23
CDC42BPAQ5VT25 AL355334.1-201ENST00000417713 215 ntBASIC22.77■■□□□ 1.23
CDC42BPAQ5VT25 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC22.77■■□□□ 1.23
CDC42BPAQ5VT25 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC22.77■■□□□ 1.23
CDC42BPAQ5VT25 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC22.77■■□□□ 1.23
CDC42BPAQ5VT25 VPS18-202ENST00000558474 873 ntTSL 3 BASIC22.77■■□□□ 1.23
CDC42BPAQ5VT25 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC22.77■■□□□ 1.23
CDC42BPAQ5VT25 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC22.77■■□□□ 1.23
CDC42BPAQ5VT25 AC007718.1-201ENST00000621078 280 ntBASIC22.77■■□□□ 1.23
CDC42BPAQ5VT25 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC22.77■■□□□ 1.23
CDC42BPAQ5VT25 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CDC42BPAQ5VT25 AC136759.1-202ENST00000530858 2194 ntBASIC22.76■■□□□ 1.23
CDC42BPAQ5VT25 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC22.76■■□□□ 1.23
CDC42BPAQ5VT25 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CDC42BPAQ5VT25 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CDC42BPAQ5VT25 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
CDC42BPAQ5VT25 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CDC42BPAQ5VT25 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC22.76■■□□□ 1.23
CDC42BPAQ5VT25 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CDC42BPAQ5VT25 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CDC42BPAQ5VT25 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC22.76■■□□□ 1.23
CDC42BPAQ5VT25 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CDC42BPAQ5VT25 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CDC42BPAQ5VT25 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
CDC42BPAQ5VT25 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CDC42BPAQ5VT25 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CDC42BPAQ5VT25 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC22.76■■□□□ 1.23
CDC42BPAQ5VT25 SCARNA21-201ENST00000517026 139 ntBASIC22.76■■□□□ 1.23
CDC42BPAQ5VT25 AC131206.1-201ENST00000538078 1211 ntBASIC22.76■■□□□ 1.23
CDC42BPAQ5VT25 MIR3147-201ENST00000577811 66 ntBASIC22.76■■□□□ 1.23
CDC42BPAQ5VT25 NAT9-211ENST00000580632 799 ntTSL 3 BASIC22.76■■□□□ 1.23
CDC42BPAQ5VT25 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC22.76■■□□□ 1.23
CDC42BPAQ5VT25 AL109837.1-201ENST00000603272 613 ntBASIC22.76■■□□□ 1.23
CDC42BPAQ5VT25 CMC2-224ENST00000630396 481 ntTSL 5 BASIC22.76■■□□□ 1.23
CDC42BPAQ5VT25 DDX5-235ENST00000630471 473 ntTSL 4 BASIC22.76■■□□□ 1.23
CDC42BPAQ5VT25 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
CDC42BPAQ5VT25 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
CDC42BPAQ5VT25 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC22.76■■□□□ 1.23
CDC42BPAQ5VT25 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
CDC42BPAQ5VT25 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC22.75■■□□□ 1.23
CDC42BPAQ5VT25 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC22.75■■□□□ 1.23
CDC42BPAQ5VT25 AC092850.2-201ENST00000623821 2697 ntBASIC22.75■■□□□ 1.23
CDC42BPAQ5VT25 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC22.75■■□□□ 1.23
CDC42BPAQ5VT25 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CDC42BPAQ5VT25 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CDC42BPAQ5VT25 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
CDC42BPAQ5VT25 LINC02199-201ENST00000506655 2702 ntBASIC22.75■■□□□ 1.23
CDC42BPAQ5VT25 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CDC42BPAQ5VT25 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC22.75■■□□□ 1.23
CDC42BPAQ5VT25 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CDC42BPAQ5VT25 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CDC42BPAQ5VT25 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
CDC42BPAQ5VT25 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
CDC42BPAQ5VT25 OR2R1P-201ENST00000441404 914 ntBASIC22.75■■□□□ 1.23
CDC42BPAQ5VT25 CICP12-201ENST00000455801 843 ntBASIC22.75■■□□□ 1.23
CDC42BPAQ5VT25 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC22.75■■□□□ 1.23
CDC42BPAQ5VT25 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC22.75■■□□□ 1.23
CDC42BPAQ5VT25 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
CDC42BPAQ5VT25 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
CDC42BPAQ5VT25 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
CDC42BPAQ5VT25 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC22.75■■□□□ 1.23
CDC42BPAQ5VT25 COX6A1P2-201ENST00000620597 330 ntBASIC22.75■■□□□ 1.23
CDC42BPAQ5VT25 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CDC42BPAQ5VT25 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
CDC42BPAQ5VT25 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC22.75■■□□□ 1.23
CDC42BPAQ5VT25 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CDC42BPAQ5VT25 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CDC42BPAQ5VT25 LINC01165-201ENST00000445190 1623 ntBASIC22.75■■□□□ 1.23
CDC42BPAQ5VT25 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CDC42BPAQ5VT25 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.74■■□□□ 1.23
CDC42BPAQ5VT25 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
CDC42BPAQ5VT25 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CDC42BPAQ5VT25 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CDC42BPAQ5VT25 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC22.74■■□□□ 1.23
CDC42BPAQ5VT25 AC012441.2-201ENST00000444843 739 ntBASIC22.74■■□□□ 1.23
CDC42BPAQ5VT25 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CDC42BPAQ5VT25 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC22.74■■□□□ 1.23
CDC42BPAQ5VT25 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC22.74■■□□□ 1.23
CDC42BPAQ5VT25 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC22.74■■□□□ 1.23
CDC42BPAQ5VT25 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC22.74■■□□□ 1.23
CDC42BPAQ5VT25 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CDC42BPAQ5VT25 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms