Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
RFX4Q33E94 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RFX4Q33E94 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.48□□□□□ -0.09
RFX4Q33E94 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RFX4Q33E94 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RFX4Q33E94 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RFX4Q33E94 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.48□□□□□ -0.09
RFX4Q33E94 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RFX4Q33E94 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
RFX4Q33E94 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFX4Q33E94 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFX4Q33E94 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RFX4Q33E94 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.47□□□□□ -0.09
RFX4Q33E94 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.47□□□□□ -0.09
RFX4Q33E94 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
RFX4Q33E94 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.47□□□□□ -0.09
RFX4Q33E94 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.47□□□□□ -0.09
RFX4Q33E94 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.47□□□□□ -0.09
RFX4Q33E94 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
RFX4Q33E94 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFX4Q33E94 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
RFX4Q33E94 INTS4P1-203ENST00000641008 3683 ntBASIC14.47□□□□□ -0.09
RFX4Q33E94 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFX4Q33E94 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFX4Q33E94 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFX4Q33E94 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFX4Q33E94 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFX4Q33E94 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
RFX4Q33E94 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
RFX4Q33E94 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
RFX4Q33E94 AC007967.2-201ENST00000432613 625 ntBASIC14.47□□□□□ -0.09
RFX4Q33E94 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.47□□□□□ -0.09
RFX4Q33E94 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.47□□□□□ -0.09
RFX4Q33E94 AC105233.2-201ENST00000523697 349 ntBASIC14.47□□□□□ -0.09
RFX4Q33E94 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.47□□□□□ -0.09
RFX4Q33E94 AF228730.5-201ENST00000530288 346 ntBASIC14.47□□□□□ -0.09
RFX4Q33E94 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.47□□□□□ -0.09
RFX4Q33E94 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.47□□□□□ -0.09
RFX4Q33E94 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.47□□□□□ -0.09
RFX4Q33E94 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.47□□□□□ -0.09
RFX4Q33E94 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.47□□□□□ -0.09
RFX4Q33E94 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.47□□□□□ -0.09
RFX4Q33E94 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFX4Q33E94 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFX4Q33E94 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RFX4Q33E94 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RFX4Q33E94 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFX4Q33E94 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
RFX4Q33E94 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.47□□□□□ -0.09
RFX4Q33E94 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
RFX4Q33E94 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFX4Q33E94 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFX4Q33E94 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFX4Q33E94 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFX4Q33E94 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
RFX4Q33E94 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFX4Q33E94 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFX4Q33E94 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
RFX4Q33E94 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFX4Q33E94 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RFX4Q33E94 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.46□□□□□ -0.09
RFX4Q33E94 REXO1L2P-201ENST00000425429 2069 ntBASIC14.46□□□□□ -0.09
RFX4Q33E94 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
RFX4Q33E94 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
RFX4Q33E94 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.46□□□□□ -0.09
RFX4Q33E94 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFX4Q33E94 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.46□□□□□ -0.09
RFX4Q33E94 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.46□□□□□ -0.09
RFX4Q33E94 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFX4Q33E94 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFX4Q33E94 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RFX4Q33E94 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.46□□□□□ -0.09
RFX4Q33E94 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFX4Q33E94 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RFX4Q33E94 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFX4Q33E94 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RFX4Q33E94 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFX4Q33E94 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFX4Q33E94 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFX4Q33E94 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFX4Q33E94 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RFX4Q33E94 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.46□□□□□ -0.09
RFX4Q33E94 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RFX4Q33E94 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFX4Q33E94 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.46□□□□□ -0.09
RFX4Q33E94 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFX4Q33E94 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.46□□□□□ -0.09
RFX4Q33E94 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.46□□□□□ -0.09
RFX4Q33E94 RPL13AP23-201ENST00000480739 586 ntBASIC14.46□□□□□ -0.09
RFX4Q33E94 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.46□□□□□ -0.09
RFX4Q33E94 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.46□□□□□ -0.09
RFX4Q33E94 RARRES2P8-201ENST00000566335 367 ntBASIC14.46□□□□□ -0.09
RFX4Q33E94 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFX4Q33E94 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.46□□□□□ -0.09
RFX4Q33E94 AC099522.2-201ENST00000607001 744 ntBASIC14.46□□□□□ -0.09
RFX4Q33E94 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.46□□□□□ -0.09
RFX4Q33E94 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.46□□□□□ -0.09
RFX4Q33E94 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RFX4Q33E94 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFX4Q33E94 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms