Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DSC1Q08554 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DSC1Q08554 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DSC1Q08554 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
DSC1Q08554 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
DSC1Q08554 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DSC1Q08554 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DSC1Q08554 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.28■□□□□ 0.2
DSC1Q08554 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.28■□□□□ 0.2
DSC1Q08554 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.28■□□□□ 0.2
DSC1Q08554 AC091804.1-201ENST00000486888 567 ntBASIC16.28■□□□□ 0.2
DSC1Q08554 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.28■□□□□ 0.2
DSC1Q08554 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.28■□□□□ 0.2
DSC1Q08554 FTLP10-202ENST00000505798 471 ntBASIC16.28■□□□□ 0.2
DSC1Q08554 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
DSC1Q08554 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.28■□□□□ 0.2
DSC1Q08554 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.28■□□□□ 0.2
DSC1Q08554 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DSC1Q08554 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.28■□□□□ 0.2
DSC1Q08554 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DSC1Q08554 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
DSC1Q08554 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DSC1Q08554 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DSC1Q08554 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.28■□□□□ 0.2
DSC1Q08554 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.28■□□□□ 0.2
DSC1Q08554 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DSC1Q08554 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
DSC1Q08554 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
DSC1Q08554 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.28■□□□□ 0.2
DSC1Q08554 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.28■□□□□ 0.2
DSC1Q08554 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
DSC1Q08554 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.28■□□□□ 0.2
DSC1Q08554 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DSC1Q08554 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
DSC1Q08554 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DSC1Q08554 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DSC1Q08554 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DSC1Q08554 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DSC1Q08554 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.27■□□□□ 0.2
DSC1Q08554 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DSC1Q08554 REXO1L4P-201ENST00000605109 1937 ntBASIC16.27■□□□□ 0.2
DSC1Q08554 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
DSC1Q08554 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DSC1Q08554 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DSC1Q08554 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DSC1Q08554 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DSC1Q08554 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DSC1Q08554 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DSC1Q08554 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DSC1Q08554 CALR4P-201ENST00000431943 946 ntBASIC16.27■□□□□ 0.2
DSC1Q08554 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DSC1Q08554 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.27■□□□□ 0.2
DSC1Q08554 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.27■□□□□ 0.2
DSC1Q08554 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.27■□□□□ 0.2
DSC1Q08554 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.27■□□□□ 0.2
DSC1Q08554 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.27■□□□□ 0.2
DSC1Q08554 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.27■□□□□ 0.2
DSC1Q08554 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DSC1Q08554 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DSC1Q08554 DOC2GP-204ENST00000639052 2548 ntBASIC16.27■□□□□ 0.2
DSC1Q08554 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
DSC1Q08554 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
DSC1Q08554 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
DSC1Q08554 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
DSC1Q08554 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
DSC1Q08554 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
DSC1Q08554 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
DSC1Q08554 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DSC1Q08554 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
DSC1Q08554 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DSC1Q08554 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
DSC1Q08554 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
DSC1Q08554 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
DSC1Q08554 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DSC1Q08554 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
DSC1Q08554 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DSC1Q08554 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.26■□□□□ 0.19
DSC1Q08554 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DSC1Q08554 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.26■□□□□ 0.19
DSC1Q08554 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DSC1Q08554 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
DSC1Q08554 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.26■□□□□ 0.19
DSC1Q08554 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
DSC1Q08554 AL136309.1-201ENST00000403917 691 ntBASIC16.26■□□□□ 0.19
DSC1Q08554 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
DSC1Q08554 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DSC1Q08554 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.26■□□□□ 0.19
DSC1Q08554 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.26■□□□□ 0.19
DSC1Q08554 ARTN-209ENST00000479128 471 ntTSL 3 BASIC16.26■□□□□ 0.19
DSC1Q08554 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.26■□□□□ 0.19
DSC1Q08554 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.26■□□□□ 0.19
DSC1Q08554 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.26■□□□□ 0.19
DSC1Q08554 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.26■□□□□ 0.19
DSC1Q08554 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DSC1Q08554 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.26■□□□□ 0.19
DSC1Q08554 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
DSC1Q08554 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
DSC1Q08554 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DSC1Q08554 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DSC1Q08554 KRT8P4-201ENST00000509735 1454 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms