Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.19□□□□□ -0.14
LTBQ06643 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LTBQ06643 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LTBQ06643 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LTBQ06643 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
LTBQ06643 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.18□□□□□ -0.14
LTBQ06643 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LTBQ06643 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.18□□□□□ -0.14
LTBQ06643 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.18□□□□□ -0.14
LTBQ06643 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
LTBQ06643 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.18□□□□□ -0.14
LTBQ06643 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LTBQ06643 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LTBQ06643 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.18□□□□□ -0.14
LTBQ06643 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LTBQ06643 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LTBQ06643 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.18□□□□□ -0.14
LTBQ06643 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.18□□□□□ -0.14
LTBQ06643 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LTBQ06643 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LTBQ06643 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
LTBQ06643 KRT18P64-201ENST00000434946 1219 ntBASIC14.18□□□□□ -0.14
LTBQ06643 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.18□□□□□ -0.14
LTBQ06643 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.18□□□□□ -0.14
LTBQ06643 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.18□□□□□ -0.14
LTBQ06643 AC069120.2-201ENST00000524091 540 ntBASIC14.18□□□□□ -0.14
LTBQ06643 AL512361.1-201ENST00000554200 418 ntBASIC14.18□□□□□ -0.14
LTBQ06643 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LTBQ06643 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.18□□□□□ -0.14
LTBQ06643 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.18□□□□□ -0.14
LTBQ06643 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.18□□□□□ -0.14
LTBQ06643 AC025048.3-201ENST00000590609 569 ntBASIC14.18□□□□□ -0.14
LTBQ06643 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LTBQ06643 AC004233.3-201ENST00000607794 1269 ntBASIC14.18□□□□□ -0.14
LTBQ06643 AC009118.2-201ENST00000613275 655 ntBASIC14.18□□□□□ -0.14
LTBQ06643 AC005702.4-201ENST00000618393 416 ntBASIC14.18□□□□□ -0.14
LTBQ06643 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.18□□□□□ -0.14
LTBQ06643 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
LTBQ06643 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.18□□□□□ -0.14
LTBQ06643 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LTBQ06643 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LTBQ06643 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LTBQ06643 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LTBQ06643 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
LTBQ06643 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
LTBQ06643 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LTBQ06643 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LTBQ06643 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LTBQ06643 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LTBQ06643 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.18□□□□□ -0.14
LTBQ06643 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LTBQ06643 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.18□□□□□ -0.14
LTBQ06643 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
LTBQ06643 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.17□□□□□ -0.14
LTBQ06643 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LTBQ06643 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.17□□□□□ -0.14
LTBQ06643 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
LTBQ06643 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LTBQ06643 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LTBQ06643 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.17□□□□□ -0.14
LTBQ06643 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.17□□□□□ -0.14
LTBQ06643 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LTBQ06643 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LTBQ06643 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LTBQ06643 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LTBQ06643 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LTBQ06643 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LTBQ06643 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.17□□□□□ -0.14
LTBQ06643 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LTBQ06643 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LTBQ06643 Z97205.2-201ENST00000564697 1639 ntBASIC14.17□□□□□ -0.14
LTBQ06643 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LTBQ06643 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LTBQ06643 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LTBQ06643 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LTBQ06643 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.17□□□□□ -0.14
LTBQ06643 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LTBQ06643 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.17□□□□□ -0.14
LTBQ06643 HLA-V-204ENST00000476601 1289 ntBASIC14.17□□□□□ -0.14
LTBQ06643 AC097493.3-201ENST00000509725 367 ntBASIC14.17□□□□□ -0.14
LTBQ06643 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.17□□□□□ -0.14
LTBQ06643 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.17□□□□□ -0.14
LTBQ06643 HILS1-202ENST00000545329 423 ntBASIC14.17□□□□□ -0.14
LTBQ06643 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.17□□□□□ -0.14
LTBQ06643 TEX28P1-201ENST00000613479 1221 ntBASIC14.17□□□□□ -0.14
LTBQ06643 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
LTBQ06643 TEX28P2-201ENST00000617764 1221 ntBASIC14.17□□□□□ -0.14
LTBQ06643 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LTBQ06643 MIR6069-201ENST00000620069 79 ntBASIC14.17□□□□□ -0.14
LTBQ06643 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LTBQ06643 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LTBQ06643 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LTBQ06643 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LTBQ06643 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LTBQ06643 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LTBQ06643 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.17□□□□□ -0.14
LTBQ06643 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.17□□□□□ -0.14
LTBQ06643 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LTBQ06643 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.17□□□□□ -0.14
LTBQ06643 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms