Protein–RNA interactions for Protein: Q05655

PRKCD, Protein kinase C delta type, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCDQ05655 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PRKCDQ05655 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.33□□□□□ -0.12
PRKCDQ05655 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
PRKCDQ05655 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PRKCDQ05655 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PRKCDQ05655 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PRKCDQ05655 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.33□□□□□ -0.12
PRKCDQ05655 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
PRKCDQ05655 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PRKCDQ05655 MIR574-201ENST00000385209 96 ntBASIC14.33□□□□□ -0.12
PRKCDQ05655 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PRKCDQ05655 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.33□□□□□ -0.12
PRKCDQ05655 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
PRKCDQ05655 AZGP1P1-201ENST00000411909 902 ntBASIC14.33□□□□□ -0.12
PRKCDQ05655 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.33□□□□□ -0.12
PRKCDQ05655 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.33□□□□□ -0.12
PRKCDQ05655 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.33□□□□□ -0.12
PRKCDQ05655 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.33□□□□□ -0.12
PRKCDQ05655 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PRKCDQ05655 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PRKCDQ05655 AC010327.5-201ENST00000586923 3061 ntBASIC14.33□□□□□ -0.12
PRKCDQ05655 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
PRKCDQ05655 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PRKCDQ05655 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.33□□□□□ -0.12
PRKCDQ05655 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PRKCDQ05655 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PRKCDQ05655 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PRKCDQ05655 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PRKCDQ05655 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
PRKCDQ05655 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
PRKCDQ05655 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PRKCDQ05655 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
PRKCDQ05655 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PRKCDQ05655 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PRKCDQ05655 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PRKCDQ05655 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
PRKCDQ05655 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
PRKCDQ05655 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.32□□□□□ -0.12
PRKCDQ05655 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
PRKCDQ05655 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.32□□□□□ -0.12
PRKCDQ05655 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PRKCDQ05655 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PRKCDQ05655 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCDQ05655 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCDQ05655 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCDQ05655 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCDQ05655 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.32□□□□□ -0.12
PRKCDQ05655 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCDQ05655 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCDQ05655 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCDQ05655 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PRKCDQ05655 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.32□□□□□ -0.12
PRKCDQ05655 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.32□□□□□ -0.12
PRKCDQ05655 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.32□□□□□ -0.12
PRKCDQ05655 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.32□□□□□ -0.12
PRKCDQ05655 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.32□□□□□ -0.12
PRKCDQ05655 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCDQ05655 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.32□□□□□ -0.12
PRKCDQ05655 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCDQ05655 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.32□□□□□ -0.12
PRKCDQ05655 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PRKCDQ05655 AC105339.1-204ENST00000636249 355 ntBASIC14.32□□□□□ -0.12
PRKCDQ05655 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCDQ05655 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCDQ05655 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCDQ05655 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCDQ05655 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCDQ05655 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCDQ05655 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCDQ05655 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
PRKCDQ05655 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCDQ05655 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PRKCDQ05655 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
PRKCDQ05655 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCDQ05655 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.32□□□□□ -0.12
PRKCDQ05655 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PRKCDQ05655 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCDQ05655 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCDQ05655 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.32□□□□□ -0.12
PRKCDQ05655 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.31□□□□□ -0.12
PRKCDQ05655 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
PRKCDQ05655 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRKCDQ05655 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRKCDQ05655 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRKCDQ05655 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRKCDQ05655 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
PRKCDQ05655 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
PRKCDQ05655 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRKCDQ05655 ELL2P1-201ENST00000413990 1906 ntBASIC14.31□□□□□ -0.12
PRKCDQ05655 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.31□□□□□ -0.12
PRKCDQ05655 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
PRKCDQ05655 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
PRKCDQ05655 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.31□□□□□ -0.12
PRKCDQ05655 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRKCDQ05655 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRKCDQ05655 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PRKCDQ05655 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
PRKCDQ05655 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRKCDQ05655 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
PRKCDQ05655 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms