Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC16.31■□□□□ 0.2
UBE3AQ05086 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE3AQ05086 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.31■□□□□ 0.2
UBE3AQ05086 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBE3AQ05086 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
UBE3AQ05086 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE3AQ05086 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBE3AQ05086 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.31■□□□□ 0.2
UBE3AQ05086 PARP8-206ENST00000503665 572 ntTSL 4 BASIC16.31■□□□□ 0.2
UBE3AQ05086 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.31■□□□□ 0.2
UBE3AQ05086 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.31■□□□□ 0.2
UBE3AQ05086 CHMP4BP1-201ENST00000556017 588 ntBASIC16.31■□□□□ 0.2
UBE3AQ05086 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.31■□□□□ 0.2
UBE3AQ05086 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.31■□□□□ 0.2
UBE3AQ05086 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.31■□□□□ 0.2
UBE3AQ05086 CU633904.3-201ENST00000624042 1029 ntBASIC16.31■□□□□ 0.2
UBE3AQ05086 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE3AQ05086 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE3AQ05086 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE3AQ05086 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.31■□□□□ 0.2
UBE3AQ05086 AL365209.1-201ENST00000624418 6473 ntBASIC16.31■□□□□ 0.2
UBE3AQ05086 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE3AQ05086 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE3AQ05086 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.31■□□□□ 0.2
UBE3AQ05086 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE3AQ05086 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
UBE3AQ05086 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBE3AQ05086 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
UBE3AQ05086 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.31■□□□□ 0.2
UBE3AQ05086 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.31■□□□□ 0.2
UBE3AQ05086 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
UBE3AQ05086 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
UBE3AQ05086 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE3AQ05086 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.3■□□□□ 0.2
UBE3AQ05086 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBE3AQ05086 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
UBE3AQ05086 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBE3AQ05086 AL391005.1-201ENST00000623953 2435 ntBASIC16.3■□□□□ 0.2
UBE3AQ05086 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBE3AQ05086 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBE3AQ05086 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBE3AQ05086 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
UBE3AQ05086 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBE3AQ05086 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBE3AQ05086 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBE3AQ05086 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBE3AQ05086 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBE3AQ05086 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
UBE3AQ05086 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBE3AQ05086 AC092171.3-201ENST00000610122 2651 ntBASIC16.3■□□□□ 0.2
UBE3AQ05086 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.3■□□□□ 0.2
UBE3AQ05086 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBE3AQ05086 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBE3AQ05086 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.3■□□□□ 0.2
UBE3AQ05086 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBE3AQ05086 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.3■□□□□ 0.2
UBE3AQ05086 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.3■□□□□ 0.2
UBE3AQ05086 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.3■□□□□ 0.2
UBE3AQ05086 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
UBE3AQ05086 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.3■□□□□ 0.2
UBE3AQ05086 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.3■□□□□ 0.2
UBE3AQ05086 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.3■□□□□ 0.2
UBE3AQ05086 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.3■□□□□ 0.2
UBE3AQ05086 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC16.3■□□□□ 0.2
UBE3AQ05086 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
UBE3AQ05086 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.3■□□□□ 0.2
UBE3AQ05086 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.3■□□□□ 0.2
UBE3AQ05086 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
UBE3AQ05086 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBE3AQ05086 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBE3AQ05086 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.3■□□□□ 0.2
UBE3AQ05086 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBE3AQ05086 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
UBE3AQ05086 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBE3AQ05086 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.3■□□□□ 0.2
UBE3AQ05086 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
UBE3AQ05086 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
UBE3AQ05086 AC046158.3-201ENST00000624947 2558 ntBASIC16.3■□□□□ 0.2
UBE3AQ05086 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE3AQ05086 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.29■□□□□ 0.2
UBE3AQ05086 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE3AQ05086 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.29■□□□□ 0.2
UBE3AQ05086 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE3AQ05086 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.29■□□□□ 0.2
UBE3AQ05086 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBE3AQ05086 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE3AQ05086 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE3AQ05086 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE3AQ05086 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
UBE3AQ05086 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE3AQ05086 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBE3AQ05086 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.29■□□□□ 0.2
UBE3AQ05086 NKAIN1P1-201ENST00000435754 582 ntBASIC16.29■□□□□ 0.2
UBE3AQ05086 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.29■□□□□ 0.2
UBE3AQ05086 MAGEA5-201ENST00000446757 942 ntBASIC16.29■□□□□ 0.2
UBE3AQ05086 AL133466.1-201ENST00000447582 150 ntBASIC16.29■□□□□ 0.2
UBE3AQ05086 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.29■□□□□ 0.2
UBE3AQ05086 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBE3AQ05086 TSACC-208ENST00000481479 741 ntTSL 2 BASIC16.29■□□□□ 0.2
UBE3AQ05086 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms