Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.29■□□□□ 0.04
CDKL1Q00532 RPL13P2-201ENST00000440687 659 ntBASIC15.29■□□□□ 0.04
CDKL1Q00532 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.29■□□□□ 0.04
CDKL1Q00532 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.29■□□□□ 0.04
CDKL1Q00532 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL1Q00532 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.29■□□□□ 0.04
CDKL1Q00532 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.29■□□□□ 0.04
CDKL1Q00532 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL1Q00532 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL1Q00532 AC074044.1-201ENST00000609673 707 ntBASIC15.29■□□□□ 0.04
CDKL1Q00532 AC139530.3-201ENST00000620344 690 ntBASIC15.29■□□□□ 0.04
CDKL1Q00532 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL1Q00532 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL1Q00532 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL1Q00532 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CDKL1Q00532 AL390755.1-201ENST00000623716 2027 ntBASIC15.29■□□□□ 0.04
CDKL1Q00532 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.29■□□□□ 0.04
CDKL1Q00532 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL1Q00532 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.29■□□□□ 0.04
CDKL1Q00532 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.28■□□□□ 0.04
CDKL1Q00532 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKL1Q00532 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKL1Q00532 AC126755.1-201ENST00000525846 6405 ntBASIC15.28■□□□□ 0.04
CDKL1Q00532 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKL1Q00532 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CDKL1Q00532 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.28■□□□□ 0.04
CDKL1Q00532 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDKL1Q00532 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CDKL1Q00532 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.28■□□□□ 0.04
CDKL1Q00532 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDKL1Q00532 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.28■□□□□ 0.04
CDKL1Q00532 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDKL1Q00532 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKL1Q00532 FAM86GP-201ENST00000448322 971 ntBASIC15.28■□□□□ 0.04
CDKL1Q00532 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.28■□□□□ 0.04
CDKL1Q00532 SDHAP3-202ENST00000515467 728 ntBASIC15.28■□□□□ 0.04
CDKL1Q00532 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKL1Q00532 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.28■□□□□ 0.04
CDKL1Q00532 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.28■□□□□ 0.04
CDKL1Q00532 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.28■□□□□ 0.04
CDKL1Q00532 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.28■□□□□ 0.04
CDKL1Q00532 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.28■□□□□ 0.04
CDKL1Q00532 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKL1Q00532 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CDKL1Q00532 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.28■□□□□ 0.04
CDKL1Q00532 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CDKL1Q00532 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKL1Q00532 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKL1Q00532 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.28■□□□□ 0.04
CDKL1Q00532 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.28■□□□□ 0.04
CDKL1Q00532 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.28■□□□□ 0.04
CDKL1Q00532 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
CDKL1Q00532 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CDKL1Q00532 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKL1Q00532 AC084364.1-201ENST00000551967 1556 ntBASIC15.28■□□□□ 0.04
CDKL1Q00532 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDKL1Q00532 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDKL1Q00532 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDKL1Q00532 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.27■□□□□ 0.04
CDKL1Q00532 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.27■□□□□ 0.04
CDKL1Q00532 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.27■□□□□ 0.04
CDKL1Q00532 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDKL1Q00532 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDKL1Q00532 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CDKL1Q00532 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDKL1Q00532 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDKL1Q00532 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CDKL1Q00532 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDKL1Q00532 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDKL1Q00532 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDKL1Q00532 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
CDKL1Q00532 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDKL1Q00532 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDKL1Q00532 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CDKL1Q00532 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDKL1Q00532 AL133267.1-201ENST00000398220 340 ntBASIC15.27■□□□□ 0.04
CDKL1Q00532 TOMM22P5-201ENST00000416399 439 ntBASIC15.27■□□□□ 0.04
CDKL1Q00532 AC015922.1-201ENST00000421102 1152 ntBASIC15.27■□□□□ 0.04
CDKL1Q00532 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.27■□□□□ 0.04
CDKL1Q00532 AC092580.3-201ENST00000430932 139 ntBASIC15.27■□□□□ 0.04
CDKL1Q00532 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.27■□□□□ 0.04
CDKL1Q00532 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDKL1Q00532 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDKL1Q00532 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.27■□□□□ 0.04
CDKL1Q00532 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.27■□□□□ 0.04
CDKL1Q00532 AC027369.6-201ENST00000525520 931 ntBASIC15.27■□□□□ 0.04
CDKL1Q00532 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.27■□□□□ 0.04
CDKL1Q00532 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDKL1Q00532 AC015910.1-201ENST00000579400 975 ntBASIC15.27■□□□□ 0.04
CDKL1Q00532 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
CDKL1Q00532 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
CDKL1Q00532 AC093028.1-201ENST00000622998 982 ntBASIC15.27■□□□□ 0.04
CDKL1Q00532 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.27■□□□□ 0.04
CDKL1Q00532 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDKL1Q00532 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDKL1Q00532 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.27■□□□□ 0.03
CDKL1Q00532 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDKL1Q00532 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDKL1Q00532 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDKL1Q00532 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms