Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
H3F3AP84243 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3AP84243 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3AP84243 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3AP84243 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3AP84243 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.85□□□□□ -0.19
H3F3AP84243 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3AP84243 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3AP84243 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3AP84243 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.85□□□□□ -0.19
H3F3AP84243 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3AP84243 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
H3F3AP84243 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.85□□□□□ -0.19
H3F3AP84243 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3AP84243 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.85□□□□□ -0.19
H3F3AP84243 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.85□□□□□ -0.19
H3F3AP84243 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.85□□□□□ -0.19
H3F3AP84243 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.85□□□□□ -0.19
H3F3AP84243 AC098850.1-201ENST00000419919 790 ntBASIC13.85□□□□□ -0.19
H3F3AP84243 AL442647.2-201ENST00000429864 857 ntBASIC13.85□□□□□ -0.19
H3F3AP84243 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.85□□□□□ -0.19
H3F3AP84243 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3AP84243 AC104596.2-201ENST00000512793 793 ntBASIC13.85□□□□□ -0.19
H3F3AP84243 AC092552.1-201ENST00000547243 906 ntBASIC13.85□□□□□ -0.19
H3F3AP84243 AC123567.1-201ENST00000548294 1261 ntBASIC13.85□□□□□ -0.19
H3F3AP84243 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3AP84243 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.85□□□□□ -0.19
H3F3AP84243 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.85□□□□□ -0.19
H3F3AP84243 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
H3F3AP84243 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
H3F3AP84243 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3AP84243 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3AP84243 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.85□□□□□ -0.19
H3F3AP84243 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.85□□□□□ -0.19
H3F3AP84243 AC138035.3-201ENST00000622706 2791 ntBASIC13.85□□□□□ -0.19
H3F3AP84243 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3AP84243 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
H3F3AP84243 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3AP84243 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3AP84243 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3AP84243 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3AP84243 AC006486.2-201ENST00000624246 2199 ntBASIC13.85□□□□□ -0.19
H3F3AP84243 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3AP84243 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3AP84243 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.85□□□□□ -0.19
H3F3AP84243 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3AP84243 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3F3AP84243 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3AP84243 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
H3F3AP84243 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3AP84243 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.84□□□□□ -0.19
H3F3AP84243 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3AP84243 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3AP84243 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3AP84243 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3AP84243 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
H3F3AP84243 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3AP84243 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3AP84243 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3AP84243 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.84□□□□□ -0.19
H3F3AP84243 GHSR-202ENST00000427970 912 ntBASIC13.84□□□□□ -0.19
H3F3AP84243 CRB3P1-201ENST00000449338 276 ntBASIC13.84□□□□□ -0.19
H3F3AP84243 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
H3F3AP84243 TP53TG3HP-202ENST00000569755 579 ntBASIC13.84□□□□□ -0.19
H3F3AP84243 AL049840.4-201ENST00000602422 811 ntBASIC13.84□□□□□ -0.19
H3F3AP84243 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.84□□□□□ -0.19
H3F3AP84243 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.84□□□□□ -0.19
H3F3AP84243 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.84□□□□□ -0.19
H3F3AP84243 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3AP84243 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.84□□□□□ -0.19
H3F3AP84243 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3AP84243 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3AP84243 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
H3F3AP84243 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3AP84243 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3AP84243 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3AP84243 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3AP84243 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
H3F3AP84243 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3AP84243 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3AP84243 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.84□□□□□ -0.19
H3F3AP84243 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3AP84243 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
H3F3AP84243 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3AP84243 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3AP84243 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3AP84243 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3AP84243 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3AP84243 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3AP84243 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
H3F3AP84243 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
H3F3AP84243 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
H3F3AP84243 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
H3F3AP84243 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
H3F3AP84243 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
H3F3AP84243 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
H3F3AP84243 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.83□□□□□ -0.2
H3F3AP84243 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.83□□□□□ -0.2
H3F3AP84243 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3AP84243 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms