Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.48■□□□□ 0.39
HTRA3P83110 AC134043.2-201ENST00000624206 2238 ntBASIC17.48■□□□□ 0.39
HTRA3P83110 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HTRA3P83110 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HTRA3P83110 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HTRA3P83110 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HTRA3P83110 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
HTRA3P83110 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HTRA3P83110 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
HTRA3P83110 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
HTRA3P83110 FZD10-202ENST00000539839 3282 ntBASIC17.47■□□□□ 0.39
HTRA3P83110 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.47■□□□□ 0.39
HTRA3P83110 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HTRA3P83110 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HTRA3P83110 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HTRA3P83110 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HTRA3P83110 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
HTRA3P83110 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HTRA3P83110 NME6-208ENST00000435684 599 ntTSL 2 BASIC17.47■□□□□ 0.39
HTRA3P83110 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC17.47■□□□□ 0.39
HTRA3P83110 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC17.47■□□□□ 0.39
HTRA3P83110 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HTRA3P83110 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC17.47■□□□□ 0.39
HTRA3P83110 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC17.47■□□□□ 0.39
HTRA3P83110 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
HTRA3P83110 AC006483.2-201ENST00000609813 515 ntBASIC17.47■□□□□ 0.39
HTRA3P83110 MIR6893-201ENST00000613458 69 ntBASIC17.47■□□□□ 0.39
HTRA3P83110 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.47■□□□□ 0.39
HTRA3P83110 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.47■□□□□ 0.39
HTRA3P83110 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.47■□□□□ 0.39
HTRA3P83110 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HTRA3P83110 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HTRA3P83110 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HTRA3P83110 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.47■□□□□ 0.39
HTRA3P83110 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HTRA3P83110 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.47■□□□□ 0.39
HTRA3P83110 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
HTRA3P83110 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HTRA3P83110 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HTRA3P83110 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HTRA3P83110 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HTRA3P83110 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HTRA3P83110 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
HTRA3P83110 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HTRA3P83110 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HTRA3P83110 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HTRA3P83110 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.46■□□□□ 0.39
HTRA3P83110 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HTRA3P83110 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HTRA3P83110 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.46■□□□□ 0.39
HTRA3P83110 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC17.46■□□□□ 0.39
HTRA3P83110 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HTRA3P83110 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HTRA3P83110 RNA5SP359-201ENST00000364838 113 ntBASIC17.46■□□□□ 0.39
HTRA3P83110 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC17.46■□□□□ 0.39
HTRA3P83110 HIST1H2APS2-201ENST00000454426 370 ntBASIC17.46■□□□□ 0.39
HTRA3P83110 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC17.46■□□□□ 0.39
HTRA3P83110 AC114947.1-202ENST00000514136 344 ntBASIC17.46■□□□□ 0.39
HTRA3P83110 CASP3-205ENST00000517513 964 ntTSL 5 BASIC17.46■□□□□ 0.39
HTRA3P83110 GPX3-202ENST00000517973 612 ntTSL 3 BASIC17.46■□□□□ 0.39
HTRA3P83110 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HTRA3P83110 AC080013.5-201ENST00000607044 679 ntBASIC17.46■□□□□ 0.39
HTRA3P83110 AC010976.2-201ENST00000609697 852 ntBASIC17.46■□□□□ 0.39
HTRA3P83110 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC17.46■□□□□ 0.39
HTRA3P83110 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC17.46■□□□□ 0.39
HTRA3P83110 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
HTRA3P83110 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
HTRA3P83110 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HTRA3P83110 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HTRA3P83110 AC011840.2-201ENST00000563063 1520 ntBASIC17.46■□□□□ 0.39
HTRA3P83110 REXO1L5P-201ENST00000622260 2098 ntBASIC17.46■□□□□ 0.39
HTRA3P83110 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HTRA3P83110 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.46■□□□□ 0.39
HTRA3P83110 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HTRA3P83110 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HTRA3P83110 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
HTRA3P83110 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
HTRA3P83110 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
HTRA3P83110 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.46■□□□□ 0.38
HTRA3P83110 AL138725.1-201ENST00000407347 1314 ntBASIC17.46■□□□□ 0.38
HTRA3P83110 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC17.46■□□□□ 0.38
HTRA3P83110 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HTRA3P83110 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HTRA3P83110 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.45■□□□□ 0.38
HTRA3P83110 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
HTRA3P83110 CYP4F23P-201ENST00000593402 1579 ntBASIC17.45■□□□□ 0.38
HTRA3P83110 AC025183.3-201ENST00000623526 1482 ntBASIC17.45■□□□□ 0.38
HTRA3P83110 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.45■□□□□ 0.38
HTRA3P83110 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HTRA3P83110 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HTRA3P83110 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HTRA3P83110 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC17.45■□□□□ 0.38
HTRA3P83110 MAGEA7P-201ENST00000436482 942 ntBASIC17.45■□□□□ 0.38
HTRA3P83110 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC17.45■□□□□ 0.38
HTRA3P83110 RPL3P5-201ENST00000441645 1232 ntBASIC17.45■□□□□ 0.38
HTRA3P83110 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.45■□□□□ 0.38
HTRA3P83110 AC108724.1-201ENST00000481669 352 ntBASIC17.45■□□□□ 0.38
HTRA3P83110 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HTRA3P83110 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC17.45■□□□□ 0.38
HTRA3P83110 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms