Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEP78395 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEP78395 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEP78395 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEP78395 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEP78395 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEP78395 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEP78395 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEP78395 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEP78395 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEP78395 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.69■□□□□ 0.1
PRAMEP78395 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEP78395 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.69■□□□□ 0.1
PRAMEP78395 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
PRAMEP78395 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.69■□□□□ 0.1
PRAMEP78395 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PRAMEP78395 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.69■□□□□ 0.1
PRAMEP78395 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEP78395 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.69■□□□□ 0.1
PRAMEP78395 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.69■□□□□ 0.1
PRAMEP78395 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.69■□□□□ 0.1
PRAMEP78395 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.69■□□□□ 0.1
PRAMEP78395 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEP78395 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEP78395 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.69■□□□□ 0.1
PRAMEP78395 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEP78395 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEP78395 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEP78395 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.69■□□□□ 0.1
PRAMEP78395 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEP78395 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEP78395 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
PRAMEP78395 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEP78395 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
PRAMEP78395 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEP78395 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.69■□□□□ 0.1
PRAMEP78395 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PRAMEP78395 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.69■□□□□ 0.1
PRAMEP78395 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEP78395 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEP78395 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PRAMEP78395 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEP78395 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEP78395 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
PRAMEP78395 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.68■□□□□ 0.1
PRAMEP78395 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.68■□□□□ 0.1
PRAMEP78395 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEP78395 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEP78395 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEP78395 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
PRAMEP78395 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEP78395 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
PRAMEP78395 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.68■□□□□ 0.1
PRAMEP78395 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEP78395 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.68■□□□□ 0.1
PRAMEP78395 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEP78395 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEP78395 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.68■□□□□ 0.1
PRAMEP78395 AC074338.1-201ENST00000416825 156 ntBASIC15.68■□□□□ 0.1
PRAMEP78395 TREML5P-201ENST00000421694 576 ntBASIC15.68■□□□□ 0.1
PRAMEP78395 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.68■□□□□ 0.1
PRAMEP78395 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.68■□□□□ 0.1
PRAMEP78395 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEP78395 IGHV3-42-201ENST00000520410 361 ntBASIC15.68■□□□□ 0.1
PRAMEP78395 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.68■□□□□ 0.1
PRAMEP78395 AC010336.2-201ENST00000564226 506 ntBASIC15.68■□□□□ 0.1
PRAMEP78395 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.68■□□□□ 0.1
PRAMEP78395 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.68■□□□□ 0.1
PRAMEP78395 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.68■□□□□ 0.1
PRAMEP78395 AC074044.1-201ENST00000609673 707 ntBASIC15.68■□□□□ 0.1
PRAMEP78395 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PRAMEP78395 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.68■□□□□ 0.1
PRAMEP78395 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PRAMEP78395 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEP78395 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEP78395 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
PRAMEP78395 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PRAMEP78395 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEP78395 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.68■□□□□ 0.1
PRAMEP78395 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.68■□□□□ 0.1
PRAMEP78395 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.68■□□□□ 0.1
PRAMEP78395 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEP78395 AC126365.1-201ENST00000578585 1514 ntBASIC15.68■□□□□ 0.1
PRAMEP78395 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.68■□□□□ 0.1
PRAMEP78395 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEP78395 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEP78395 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEP78395 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.67■□□□□ 0.1
PRAMEP78395 AC148477.4-201ENST00000613430 1793 ntBASIC15.67■□□□□ 0.1
PRAMEP78395 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEP78395 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PRAMEP78395 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEP78395 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEP78395 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.67■□□□□ 0.1
PRAMEP78395 AC006058.4-201ENST00000624016 1670 ntBASIC15.67■□□□□ 0.1
PRAMEP78395 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PRAMEP78395 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEP78395 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
PRAMEP78395 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEP78395 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms