Protein–RNA interactions for Protein: P63272

SUPT4H1, Transcription elongation factor SPT4, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1P63272 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SUPT4H1P63272 REXO1L4P-201ENST00000605109 1937 ntBASIC12.78□□□□□ -0.36
SUPT4H1P63272 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SUPT4H1P63272 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
SUPT4H1P63272 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.78□□□□□ -0.36
SUPT4H1P63272 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SUPT4H1P63272 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SUPT4H1P63272 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SUPT4H1P63272 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.78□□□□□ -0.36
SUPT4H1P63272 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SUPT4H1P63272 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SUPT4H1P63272 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SUPT4H1P63272 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SUPT4H1P63272 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SUPT4H1P63272 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SUPT4H1P63272 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC12.78□□□□□ -0.36
SUPT4H1P63272 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC12.78□□□□□ -0.36
SUPT4H1P63272 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC12.78□□□□□ -0.36
SUPT4H1P63272 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC12.78□□□□□ -0.36
SUPT4H1P63272 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC12.78□□□□□ -0.36
SUPT4H1P63272 NME4-207ENST00000450036 985 ntTSL 3 BASIC12.78□□□□□ -0.36
SUPT4H1P63272 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC12.78□□□□□ -0.36
SUPT4H1P63272 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.78□□□□□ -0.36
SUPT4H1P63272 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SUPT4H1P63272 AC004877.2-201ENST00000623941 599 ntBASIC12.78□□□□□ -0.36
SUPT4H1P63272 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC12.78□□□□□ -0.36
SUPT4H1P63272 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SUPT4H1P63272 BCAR1-209ENST00000546196 1340 ntBASIC12.78□□□□□ -0.36
SUPT4H1P63272 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SUPT4H1P63272 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SUPT4H1P63272 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SUPT4H1P63272 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SUPT4H1P63272 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SUPT4H1P63272 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SUPT4H1P63272 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.78□□□□□ -0.36
SUPT4H1P63272 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SUPT4H1P63272 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SUPT4H1P63272 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SUPT4H1P63272 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SUPT4H1P63272 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
SUPT4H1P63272 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC12.78□□□□□ -0.36
SUPT4H1P63272 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SUPT4H1P63272 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SUPT4H1P63272 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.78□□□□□ -0.36
SUPT4H1P63272 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.78□□□□□ -0.36
SUPT4H1P63272 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SUPT4H1P63272 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SUPT4H1P63272 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SUPT4H1P63272 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.78□□□□□ -0.36
SUPT4H1P63272 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.78□□□□□ -0.36
SUPT4H1P63272 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
SUPT4H1P63272 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SUPT4H1P63272 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SUPT4H1P63272 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.77□□□□□ -0.36
SUPT4H1P63272 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SUPT4H1P63272 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SUPT4H1P63272 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SUPT4H1P63272 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.77□□□□□ -0.36
SUPT4H1P63272 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SUPT4H1P63272 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
SUPT4H1P63272 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SUPT4H1P63272 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SUPT4H1P63272 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
SUPT4H1P63272 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.36
SUPT4H1P63272 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
SUPT4H1P63272 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
SUPT4H1P63272 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
SUPT4H1P63272 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SUPT4H1P63272 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SUPT4H1P63272 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
SUPT4H1P63272 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
SUPT4H1P63272 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.77□□□□□ -0.37
SUPT4H1P63272 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
SUPT4H1P63272 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.77□□□□□ -0.37
SUPT4H1P63272 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC12.77□□□□□ -0.37
SUPT4H1P63272 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SUPT4H1P63272 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC12.77□□□□□ -0.37
SUPT4H1P63272 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.77□□□□□ -0.37
SUPT4H1P63272 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC12.77□□□□□ -0.37
SUPT4H1P63272 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC12.77□□□□□ -0.37
SUPT4H1P63272 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC12.77□□□□□ -0.37
SUPT4H1P63272 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SUPT4H1P63272 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SUPT4H1P63272 PENK-208ENST00000523051 772 ntTSL 5 BASIC12.77□□□□□ -0.37
SUPT4H1P63272 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12.77□□□□□ -0.37
SUPT4H1P63272 KRT19P2-202ENST00000557173 1012 ntBASIC12.77□□□□□ -0.37
SUPT4H1P63272 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
SUPT4H1P63272 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC12.77□□□□□ -0.37
SUPT4H1P63272 AC099522.2-201ENST00000607001 744 ntBASIC12.77□□□□□ -0.37
SUPT4H1P63272 AL031008.1-201ENST00000619963 541 ntBASIC12.77□□□□□ -0.37
SUPT4H1P63272 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
SUPT4H1P63272 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC12.77□□□□□ -0.37
SUPT4H1P63272 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
SUPT4H1P63272 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
SUPT4H1P63272 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
SUPT4H1P63272 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SUPT4H1P63272 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.77□□□□□ -0.37
SUPT4H1P63272 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SUPT4H1P63272 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SUPT4H1P63272 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms